Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02694 ATGAGTGTAAAACACATCTGGTTCTGGACAGTACTTACTTTTCTGTTTCTGTTTTTTCTATTGATTAATTCAGAATCAGAAAATGTTAGAAAAGCCCTTGTCACGTTCATGCATAAACTTGAACCACCTGATCAGAATTTCGCATGGGGTTGGAATCTCACATCAGATCCTTGCATTCATAACTGGCACGGTGTAACTTGCTCCGCAAACAACCAATACATTAAGAGCATAGTTCTTGAAGAACTTAATCTCACCGGTGTTCTAGACGCGACTTCTCTTTGCATTTCTACATCTCTTCAATTCGTCAGCCTCAACAATAACAATTTACACGGTTTTATATCAGAGGATATAAGAAACTGCAAGTTCTTGACACACTTGCTTCTTAGTGGTAACGAATTCTCTGGCAATCTTCCTGTTTCCATTTCTCAACTACGCAATATGAAGCGCCTTCATGTTTCCGACAATCGCTTCACCGGAAACCTTCCTAATATGGTTAATGTTACAAGCTTGATATCATTTCTTGCCCAAAACAACAAATTCACTGGTCAGATTCCTGATTTTGATTTCTCAAACTTTGAAGCTTTTAATGTCTCTAACAACGATTTACGCGGTCCTGTTCCAGATGTTAGAGGTAGATTTGGTGCTGATAGTTTTTATGGTAATCCTAATCTATGTGGAAAACCAATGTCAAACTCTTCATGTCCACCACCGCCACCACCTCCTCCAATTGCTAACAAAGACAAAATCATAAATCAATTTCTTGACGATTTACCGATTTATTCAGGTTACATAGTTATTGGTTTAATTTTATTGATTTTCTTGATCTTCAAGTTGTTAAGAAAATGCAAGACCAAAGATAAAGAAAAAGGATTAGATCATGTTGAAAAGAAGGACATGTCACAAGACACTAGTGTTGTTGTTGGAGGTGGTGAAAAGCTTAGTGAGATACTTAATTCCAATGGATCAAAGAATTGGTTTAATGGCCTTGGGATGAGATCAGAGTATTCTATGACATCTATGGAAAGTGGAGTGACTACATCAGGTCTTGTTCTTCTTTCTAGTAGAAAGCTAAGGGGATTGCAATTTGAGGATTTGTTAAGTGCTCCTGCTGAATTGATTAAGAGAGGAAAACATGGAAGTTTATACAAGGTTATGTTAGATAATGGTGTGCTTTTGGCTGTTAAGAGGATCAAGGATTGGGGAATTTCAAAGCATGATTTTGAGAGAAGGATGAATTTGATAGCTCAAGTGAAGCATCCGCTTGTAATGTCACCTGTTGCATACTATTGTTCACAGCAAGAGAAGCTTCTGGCTTATGAATATCTTCCAAATGGTAGCCTCTTCATGTTGCTCTATGGATCTCAAAGCGGACATTCTCTTGACTGGAGGAGCAGACTTGATCTTGCTACTAAGATAGCTGAAGCTTTGGCTTATATGCACGAGGAGCTTGGTGAGAGTGGAATAGCACACGGCAACTTAAAATCAAGTAACATTCTGTTTGACAAGAATATGAATCCACAAATAAGCGAATATGGCCAAATGGTTTCTCAAATAAAAAGCATAAAAAACAGAAATATGTCTGCAGCCATATTCAGAGCAGATATATACGCCTTTGGTGTGATACTTCTGGAACTCCTGACAGGGAAAGTTGTTAAAAACGATGGATTCGATTTGGTTAAATGGGTGAATTCAGTGATCAGTGAAGAATGGACTGCAGAAGTTTTTGACAGGTACCTAATCTCACAAGGTGCTTCTGAAGAGAGGATGGTGAACTTGTTGCAGGTGGCATTGAAATGCACAAATCCTTCTCCAAATGACAAGCTAAGTATGAGTCAAGTGGCACTCATCACAAATGCATTGAAAGATGAAGATGACAAATCCATATCCTTTAACACATAG 1899 0.3813 MSVKHIWFWTVLTFLFLFFLLINSESENVRKALVTFMHKLEPPDQNFAWGWNLTSDPCIHNWHGVTCSANNQYIKSIVLEELNLTGVLDATSLCISTSLQFVSLNNNNLHGFISEDIRNCKFLTHLLLSGNEFSGNLPVSISQLRNMKRLHVSDNRFTGNLPNMVNVTSLISFLAQNNKFTGQIPDFDFSNFEAFNVSNNDLRGPVPDVRGRFGADSFYGNPNLCGKPMSNSSCPPPPPPPPIANKDKIINQFLDDLPIYSGYIVIGLILLIFLIFKLLRKCKTKDKEKGLDHVEKKDMSQDTSVVVGGGEKLSEILNSNGSKNWFNGLGMRSEYSMTSMESGVTTSGLVLLSSRKLRGLQFEDLLSAPAELIKRGKHGSLYKVMLDNGVLLAVKRIKDWGISKHDFERRMNLIAQVKHPLVMSPVAYYCSQQEKLLAYEYLPNGSLFMLLYGSQSGHSLDWRSRLDLATKIAEALAYMHEELGESGIAHGNLKSSNILFDKNMNPQISEYGQMVSQIKSIKNRNMSAAIFRADIYAFGVILLELLTGKVVKNDGFDLVKWVNSVISEEWTAEVFDRYLISQGASEERMVNLLQVALKCTNPSPNDKLSMSQVALITNALKDEDDKSISFNT 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02694 632 PANTHER OS05G0588300 PROTEIN 11 621 - -
Trre6g02694 632 Pfam Protein kinase domain 373 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g02694 632 SUPERFAMILY L domain-like 27 211 - -
Trre6g02694 632 ProSiteProfiles Protein kinase domain profile. 367 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g02694 632 Gene3D Transferase(Phosphotransferase) domain 1 442 631 - -
Trre6g02694 632 Gene3D Ribonuclease Inhibitor 26 209 IPR032675 -
Trre6g02694 632 Pfam Leucine rich repeat N-terminal domain 31 68 IPR013210 -
Trre6g02694 632 FunFam Nuclear pore complex protein NUP107 26 186 - -
Trre6g02694 632 Gene3D Phosphorylase Kinase; domain 1 339 441 - -
Trre6g02694 632 SUPERFAMILY Protein kinase-like (PK-like) 371 614 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02694 Trre-Chr6 23827715 23830282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02694 46 623 Receptor kinase-like Gene Family AT2G36570 34.277 2.65e-94 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trre6g02694 Pkinase 3.8e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02694 - - pvu:PHAVU_009G180700g 795.423