Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02669 ATGAACAATCCTGGCACCTCTTATCACTACTGCTCCAGATCGGTCATCCCGTCGACGCCGATTATCTATCTTCCCAATTTCATCCGTTCCGTTGCATCGCTTTCTGATTCTCCTCTCTCTGTTAACAGTAACGGTCTTCTAACTCCTTCCATTACAGCAGCTTTGTCCATCGCTAGGTTTTTCAAAGTTCATTTCAATAACTCAACTCCATCGAATTCTCGGAAACGCAAGTTGATTTTGTCAATTACTGAAGGTGGAAGAGATGCTAAACGACTAGCAATTGGTGATAAAGTTCCGGAATTTTTCGTCAGGAGTTTTTCTGATACTACTGCAGAGGCCATGATGAGAAGTTTCCGTGCAATGCAATATGAGTCTCGGATTATGCATCGAAGGAATTATATGAATCCTATACGTATTGATACAATTGGAGAGTGTTTAGGTTGTTCGGAACCAAATTTTGAATACAGGGAAGCTGATAATGATGGCATAACAAATGCGGCCCAGGGAGATATTTATGACTTTCTGATCAAAACCAGCGAGAGTTTTTTCATTAATGAAAGTGGCTTGATGAAGCTTGACATGGATATAGATAGACTTGCGGGGAATAATCCCTTTGCGAATATTCCTCCACCAACTAATGTCCAGGATCAATCTCTTTGTAATGAGGGTGGTGTTGTTGGTATTGGATCAGAGAAGAAAATGGATTGCTTTGACACATTTGGGAATGAATATCCTGAACAAAACATAACCCCTACTGTGGATGATGATGATGTTTGTAGAAACAATACTTGCAAAGATCAACTACGGGAATCTAACGAAATAAACGAAGAAGAGGAAAGAGGTCCAAACGAAGGACTAATTAATGATGACAAAAATAGAGAGATGGAAGATGTTGCTCAGAGGGTCAATCCTGTAGCATGTGGAGAAGAGCCAACGCAAGTTTTGGAATTGAAAAAGGGTATACTAAGAGAATCTAATGAAAATAGTAAAGAAGAGGAAATAGGTTTAAAGGAAGGATTGATTAGTTATGAGAAAAATAGAGAGATGGAAGATGTTGCTCAACAGGTCAATCCAATAGTATTTGGAGAAGAGCCAACAAAAGTTTTGGAATTTAAAAAGGGCATGCATGTATTAGATTTGGAGAAAAACAAGAGAGCAAGAAGCATGGTGACCCGGTCTACCAATAAAGCAGCTCAGTCCTCTTCAAATCCAAAGCAGGTTCTGAAAACTCCTCGCATATTGAAGGGAGGACTGAAAAATGATCAACATTCAATGACTCAAATTCTAACAGAGTCACTAGCCTGTAACAAATTTGATAATGTTCCAAACAAAATTGATCAATGTAAAGATGATCAGAACATTATTGCAAAAAACAAACTTAAACAAAGCCGTAAAGAAAACATGGCAGAAGATAACTCCATGACTTCTAAGGTGGAGAAAAAAACATTTCCATCTTTTGAGTCTTTTATAATAGAGGAGGAAGAAGGTTCAGGTGGTTATGGCATTGTTTACCGTGCCCAAAGAAAAACTGATGGAAAAAGACTTGCTATAAAATGTCCTCATAGTAATGCTCATAAAAACCATGTAAATAATGAGCGCAATATGCTTGAGCGTTTTGGGGGTAAAAGCTTTATTATAAAGTTTGAAGGTTCGTTCAAAAGTGCCAACAGTGACTGCTTTGTTTTAGAACATGTTGAGCATGACAGACCTGAGGTTTTGAAAAAAGAAATTGATATAACCGAGCTTCAGTGGTATGGGTTTTGCATGTTCAAGGCACTTGCGTGCTTGCACAGAGAGGGTGTCGTTCACCGAGATGTCAAACCTGGAAACTTCCTTTTCTCTCGAAAGCTAAAGAAAGGCTACCTTATTGACTTCAACCTTGCCATGGATTTAAAGCAGAAGTACAATATCGGAAGTAAATCAAAACCAAGCTTTGATGCATCCAATAATATTCCTCTGCCTTCTGGTCCTTCCTCGGTGGTTCAAGAAAAGAATCTTGGAGGAATCAATTCTCTAACATCCAATAAAAGGGAATTGACATATCATAGGAAATATTCTGAAATTAATAGGCATATGAAGCCAAAGGCTAATGCTGGTCCTCTGAAAAATTGTCCTGATAAGGCTGTTGCGAATTTACGTAGAGCACCAGGAGCAGATGGCTCAGGTATAACCTCTGCCAAAGATATTACTAGCACTAAGACTGCTTCTGCTGATAGGCTCCGAGAACCCATACCTTTCCGAGGAAGAAAAGAGCTTATCAGCCTCGTGCAGAATTCTATGCAATGTGCAAACAGTAGTTCAATTAAAAGTCCTTCTTCTCAGAGGAAAAGGGTTACTGCTCCTTCAAGCAAGGCAGATGGAAGGACACTTCATCTTACGCCGATGCCTATACATTCATCTACGGTTGCAGTGGGATCATTTAGAAGCAAAGGGGATGGAAAACATAAAAGAGAGGGCCCTTGTGTTGGAACAAAGGGATTTCGTGCCCCAGAGGTTTTATTGAGGTCTCAGATTCAAGGAACAAAGGTTGATATTTGGTCAGCTGGAGTCACTCTACTATACATGCTGATGGGAAAAACTTCTTTCCCTGGCGAACCAGAACAGAGTTTAAAAGAAATTGCCAAATTGCGGGGAAGTGAAGAGCTTTGGGAAGTGGCCAAGCTGCATGACCGTGAAGCATCCTTTCCATTGGAGTTATTTGATGACCAGTACTTGAAATCATACGACATAGAAACCTGGTGCAAGACTCACACAAAGAGACCAGAGTTTGTTGATCAAGTCCCAAAATCATTGTTTGATTTAATAGACAAGTGTCTAACAGTAAACCCAAGGAGTAGGATTAGTGTTGATGAAGTTCTAAGGCATGAATATTTTTCAAATTGTAATCGTATCTTGAGAAAGCAAAGGATGATGCGACTCGGCTTAGACAGTGACGATTAA 2940 0.3963 MNNPGTSYHYCSRSVIPSTPIIYLPNFIRSVASLSDSPLSVNSNGLLTPSITAALSIARFFKVHFNNSTPSNSRKRKLILSITEGGRDAKRLAIGDKVPEFFVRSFSDTTAEAMMRSFRAMQYESRIMHRRNYMNPIRIDTIGECLGCSEPNFEYREADNDGITNAAQGDIYDFLIKTSESFFINESGLMKLDMDIDRLAGNNPFANIPPPTNVQDQSLCNEGGVVGIGSEKKMDCFDTFGNEYPEQNITPTVDDDDVCRNNTCKDQLRESNEINEEEERGPNEGLINDDKNREMEDVAQRVNPVACGEEPTQVLELKKGILRESNENSKEEEIGLKEGLISYEKNREMEDVAQQVNPIVFGEEPTKVLEFKKGMHVLDLEKNKRARSMVTRSTNKAAQSSSNPKQVLKTPRILKGGLKNDQHSMTQILTESLACNKFDNVPNKIDQCKDDQNIIAKNKLKQSRKENMAEDNSMTSKVEKKTFPSFESFIIEEEEGSGGYGIVYRAQRKTDGKRLAIKCPHSNAHKNHVNNERNMLERFGGKSFIIKFEGSFKSANSDCFVLEHVEHDRPEVLKKEIDITELQWYGFCMFKALACLHREGVVHRDVKPGNFLFSRKLKKGYLIDFNLAMDLKQKYNIGSKSKPSFDASNNIPLPSGPSSVVQEKNLGGINSLTSNKRELTYHRKYSEINRHMKPKANAGPLKNCPDKAVANLRRAPGADGSGITSAKDITSTKTASADRLREPIPFRGRKELISLVQNSMQCANSSSIKSPSSQRKRVTAPSSKADGRTLHLTPMPIHSSTVAVGSFRSKGDGKHKREGPCVGTKGFRAPEVLLRSQIQGTKVDIWSAGVTLLYMLMGKTSFPGEPEQSLKEIAKLRGSEELWEVAKLHDREASFPLELFDDQYLKSYDIETWCKTHTKRPEFVDQVPKSLFDLIDKCLTVNPRSRISVDEVLRHEYFSNCNRILRKQRMMRLGLDSDD 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02669 979 Gene3D Transferase(Phosphotransferase) domain 1 453 644 - -
Trre6g02669 979 MobiDBLite consensus disorder prediction 763 780 - -
Trre6g02669 979 Pfam Protein kinase domain 821 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g02669 979 Pfam Protein kinase domain 493 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g02669 979 Gene3D Transferase(Phosphotransferase) domain 1 798 973 - -
Trre6g02669 979 MobiDBLite consensus disorder prediction 713 743 - -
Trre6g02669 979 ProSitePatterns Serine/Threonine protein kinases active-site signature. 601 613 IPR008271 GO:0004672|GO:0006468
Trre6g02669 979 SUPERFAMILY Protein kinase-like (PK-like) 473 962 IPR011009 -
Trre6g02669 979 SMART serkin_6 489 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g02669 979 MobiDBLite consensus disorder prediction 763 793 - -
Trre6g02669 979 FunFam Kinase like protein 799 969 - -
Trre6g02669 979 FunFam Probable serine/threonine-protein kinase DDB_G0291918 481 647 - -
Trre6g02669 979 ProSiteProfiles Protein kinase domain profile. 489 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g02669 979 PANTHER OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED 440 967 - -
Trre6g02669 979 MobiDBLite consensus disorder prediction 270 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02669 Trre-Chr6 23557836 23564280 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02669 822 961 Core Cell Cycle Gene Families AT3G48750 34.722 9.02e-13 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-2 Trre6g02669 Pkinase 1.7e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02669 K02214 - gmx:100795742 1011.52