Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02661 ATGGCTACCGCCGGTGATGTTCTCAGACAGAGTTTACCGGAAGTGGGTGTTGGTGGTGTAGCTGAGTTACATGTCCTTGCTGTGGATGATAGTTTTGTTGATCGTAAAGTTATTGAAAGGTTGCTCAAATTCACTTCTTGCAAAGTGACTGTGGTAGAGAGTGGAACTAGAGCTTTACAGTATCTGGGGTTAGATGGTGACACGAGTTCCATTGGTTTTGATGGTGTGAAGGTTAATATGATAATGACAGATTATTCCATGCCTGGGATGACAGGATATGAACTACTCAAGAAGATTAAGCAGGAATCATCTGTTTTTAGAGAAATTCCAGTGGTGGTTATGTCCTCTGAAAATATCTTAACCCGAATCGATAGTTGTTTGGAGGAAGGAGCAGAGGAGTTTCTATTGAAACCTGTCAAGTTATCCGACGTGAAACGCTTAACAGATTTCATCATGAGCGGTGAAGGGAAGAAAGTAGGAGGAAAAAGATCTCAAAAAAGAAACCGATCAGATGATTGCATTTCATCTCTATCAACCGCATGCTCAACGGTTTCTCATCCATGCGATCTATCATCACTATCACCGTCTGCAATGTCGTCAAAGAAATCTAGACTATGA 618 0.4142 MATAGDVLRQSLPEVGVGGVAELHVLAVDDSFVDRKVIERLLKFTSCKVTVVESGTRALQYLGLDGDTSSIGFDGVKVNMIMTDYSMPGMTGYELLKKIKQESSVFREIPVVVMSSENILTRIDSCLEEGAEEFLLKPVKLSDVKRLTDFIMSGEGKKVGGKRSQKRNRSDDCISSLSTACSTVSHPCDLSSLSPSAMSSKKSRL 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02661 205 PANTHER TWO-COMPONENT RESPONSE REGULATOR 23 164 IPR045279 GO:0009736
Trre6g02661 205 SMART REC_2 23 148 IPR001789 GO:0000160
Trre6g02661 205 SUPERFAMILY CheY-like 23 150 IPR011006 -
Trre6g02661 205 CDD REC_typeA_ARR 25 147 - -
Trre6g02661 205 Pfam Response regulator receiver domain 25 145 IPR001789 GO:0000160
Trre6g02661 205 Gene3D - 23 180 - -
Trre6g02661 205 ProSiteProfiles Response regulatory domain profile. 24 152 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02661 Trre-Chr6 23492382 23494536 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02661 23 180 Response Regulator Gene Family AT3G48100 69.182 7.91e-74 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Trre6g02661 Response_reg 3.2e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02661 K14492 - gmx:100306152 295.049