Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02659 ATGTCAGTTACTATTGCAATTGCTGTGTTTGCCACAGCACTGGCTATGTTACTCATTGGAGGAATTTTCCTTTACTTGTACCATAAGTTTGTTCTTGCTAGATACCAAATTAGAAGAAACAAAGTTACTAGTAAAGGTTTTTTTCATGAGATGAACCATTATGAAGATATAAAAAGATTTGGTAGTAATGTGAAAGGACTAATTGTTGAAGAAAATGGTGTTGATGTTATTTATATGATGGATAAAGAAAGTAGACAAATGATATCTAGATTTCCAAATTGTATGTACAATCCTAGTTTTGAAGAAGATGAAGAAGAAAAAGAAAAGATAATAGATGTTTTGGTTCATAGGTCTAAAGTATCTAATCCTCATGAGATTCCATTTGCATGTGAATCTCCACTTTCACTTCCACTTCCACCACTACAAAAATCTTCATCAATGAATCTTGAGAAGAAGATTCACATGAGTTATTACAATCAACCACTACCTTCTCCTCCTCCTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCACCACCACCACCACCTGCTCCTCTAAAGAAAGAAATTCCAAAGGCGCCACTTCGTCCATCGCTACTACCTTGTCCACCTCCACTTCCAAAGTCTAAAGGCTTTATTTCATCTATGAAACCACCAGCAGCACCTAAAGGGAAAGGAAATATGAAAGAGGGTATTATAGGAGAGAGTTCAAGAGATAAAGGTGGTGGCCAAACAAGGCTAAAGCCTTTACATTGGGATAAGGTTGCAGCTGATGTTGATCATTCAACTGTGTGGGATCAGATCAATGATGGATCTTTTAGGTTTGATGATGAACTCATGGAATCACTCTTTGGATATTCAAACACCTATCATAAAACCCAAGAAAGAAACAAGTCTCTTTTCACTTTGGCCAAGTCCAATTCCAACACACAAACTCAAATATTCATCCTTGAGCCAAGAAAATCTCAAAACACTGCAATTGTACTGAGATCACTAGCAGTTTCTCGGCGCGAAATCTTGGATGCAGTACTTGATGGTCAAGGACTCAGTGTTGAGACACTTGAAAAACTCACTAAAATAGCTCCCTCTCAAGAAGAAGCATCCAAAATTGTCCAATTCATCGGCAACCCGAATAACCTTGCAGAAGCTGAGTCTTTCCTATACTACATCCTTAAAGCTGTTCCAACATCGTTCAACCATTTGAAAGCAATGCTTTTCAGATCGAATTACGATAGTGAAATTCTTCGGCTTAAGGAACACTTACAAACACTTGACTTGGGTTGCAAGGAACTGAAAACTAGTAGTCTATTCTTGAAACTCCTTGAGGCAATTCTCAAAACTGGTAACAGAATGAATGCTGGAACTTCAAGAGGTAATGCACAAGGTTTCAACTTGAGTGCTCTTACAAAACTTTCTGATGTAAAAAGCACAAATGGAAAAACTAGTTTACTTCACTTCATAGTTGAACAAGTAGTTCATTCAGAAGGGAAAAGAAAAGCTATCTATGAAAAAAACAATGATGAAAGTGAAAAAGAATATGTAATTCTTGGTTTACAAGTGCTAAGTGGTCTAAGTAATGAGTTATCAGAAGCAAAAAAAGCAGCTAGCATGCACTATAACAGTTTCATCACTATGTGTTCAACTCTTAGTTCTCATGTTACTGAAATTAGACACATTATAACATCTTGTGGAAACACTAAAGGTGGATTTATGAATGAGATGAAAGGGTTTCTAGAGTTATGTGAGGAAGAACTTAAAGTGGTGAAAGAGGAACAAACAAGGATCATGGAACTTGTGAAGAAAACAAATGAGTACTATCTAGCAGGAACATCTAAAGACAATATGTCTAATCCTTTTCATTTGTTTGTTATTGTAAAAGATTTTGTTGACAAGGTTGGTCAAACTTGTATTGAACTAAAAAAGAAGGTAGAAAAGAAGAATGTAGGAGTGGAATCTATATCAACAACACCACCTTTGTCTCCATCAAAGAAGGTGCCACTGAGATTTCATAACATTGATTTAAATTTTCTGTCAAATAAGTTAGAGTTAGAGTCTACATTTTCCAGTCAGTCAGAAGATGACTTCTGA 2088 0.3649 MSVTIAIAVFATALAMLLIGGIFLYLYHKFVLARYQIRRNKVTSKGFFHEMNHYEDIKRFGSNVKGLIVEENGVDVIYMMDKESRQMISRFPNCMYNPSFEEDEEEKEKIIDVLVHRSKVSNPHEIPFACESPLSLPLPPLQKSSSMNLEKKIHMSYYNQPLPSPPPSPPPPPPPPPPPPPPPAPLKKEIPKAPLRPSLLPCPPPLPKSKGFISSMKPPAAPKGKGNMKEGIIGESSRDKGGGQTRLKPLHWDKVAADVDHSTVWDQINDGSFRFDDELMESLFGYSNTYHKTQERNKSLFTLAKSNSNTQTQIFILEPRKSQNTAIVLRSLAVSRREILDAVLDGQGLSVETLEKLTKIAPSQEEASKIVQFIGNPNNLAEAESFLYYILKAVPTSFNHLKAMLFRSNYDSEILRLKEHLQTLDLGCKELKTSSLFLKLLEAILKTGNRMNAGTSRGNAQGFNLSALTKLSDVKSTNGKTSLLHFIVEQVVHSEGKRKAIYEKNNDESEKEYVILGLQVLSGLSNELSEAKKAASMHYNSFITMCSTLSSHVTEIRHIITSCGNTKGGFMNEMKGFLELCEEELKVVKEEQTRIMELVKKTNEYYLAGTSKDNMSNPFHLFVIVKDFVDKVGQTCIELKKKVEKKNVGVESISTTPPLSPSKKVPLRFHNIDLNFLSNKLELESTFSSQSEDDF 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02659 695 PANTHER FORMIN-RELATED 4 647 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Trre6g02659 695 ProSiteProfiles Formin homology-2 (FH2) domain profile. 237 658 IPR015425 -
Trre6g02659 695 SUPERFAMILY Formin homology 2 domain (FH2 domain) 173 646 - -
Trre6g02659 695 MobiDBLite consensus disorder prediction 160 208 - -
Trre6g02659 695 MobiDBLite consensus disorder prediction 157 208 - -
Trre6g02659 695 SMART it6_source 237 647 IPR015425 -
Trre6g02659 695 Gene3D Formin, FH2 domain 260 651 IPR042201 -
Trre6g02659 695 Pfam Formin Homology 2 Domain 244 631 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02659 Trre-Chr6 23486785 23489503 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02659 4 680 FH2 protein (formin) Gene Family AT1G70140 38.367 1.71e-148 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02659 - - tpra:123885767 1179.08