Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02646 ATGATGATGATGTATGATGAGATGGCTCTATCTGGCGATCTGGATGTGTTTTCGGCTCCCGTAGTTGAGGAGGATATTACCGCCCGGCAAACTGAACCTGAGGCGATTGTCGACGAAGATTTCAGCGACGAAGAAATTGATGTTGAAGAGCTTGAGAAGAGGATGTGGAAGGATAAAATGCGTCTCAAGCGATTAAAGGAGCAAGTCAAGCCCAAAGATGGACTTGATGCTGCCAAGCAGCGGCAATCCCAAGAACAGGCAAGGAGGAAAAAGATGTCGAGGGCTCAAGACGGAATCTTGAAGTACATGCTGAAAATGATGGAGGTTTGTAAGGCTCAAGGATTTGTTTATGGGATAATTCCCGAGAAAGGAAAGCCAGTGACCGGGGCATCGGATAATCTTCGTGAATGGTGGAAGGATAAGGTCAGGTTCGATCGCAATGGTCCTGCTGCCATATCCAAGTACCAAGCAGATAATGCGATTCCGGGGAACAACGATGGAAGCAATCCGATCGGTCCAACCCCTCACACCTTGCAAGAGCTGCAGGACACAACCTTGGGTTCTCTCTTATCTGCACTGATGCAACACTGTGATCCCCCTCAGAGGCGGTTTCCATTGGAGAAGGGTGTTCCTCCTCCATGGTGGCCAACAGGTAATGAAGAGTGGTGGCCTCAAATCGGTTTACCGAAAGATCAAGGTCGTCCGCCTTACAAGAAACCTCATGACCTGAAGAAGGCGTGGAAGGTTGGAGTTCTGACAGCAGTTATCAAGCATATGTCTCCCGACATTGCAAAAATTCGCAAGCTTGTGAGGCAGTCCAAATGCCTTCAAGATAAAATGACAGCTAAGGAAAGTGCAACCTGGCTTGCAATCGTCAATCAAGAGGAGGCGATAGCGCGAGAGCTTTATCCTGATTATATCCCCCCATTTACATCAGTTGGAGGAAGTGGATCTTATGCCACCAATGATGGCACTGAGTACGATGTTTATGGGGGAGACGATGGGCCAAATTTTGATGTGGAGGAACGGAAACCTGAGAATCTTCTTCATGCATCCAACATCGGGATGATGGAGAGATTGAGAGGCGTAAGACTGCCAATTCAGCAGCCTTCTTTCCCAATGAATGGAGAGGCTGTAACAAACATGGATTTCATGCGGAAGAGGAAGATCTCTGGTGAATTTAACATGATGATGGATCAGAAAGTTTTTACTTGCGAACACTCTATGTGTCCTTATAGCGAAGTTCGCATTGGTTTTCAGGACAGAACTTCTAGGGACAATCATCAATTGAATTGTCCATATAGAGCCACTTCATCAGATTATGGTGGTCCAAGTTTTCATGCTAATGAGGTAAAACCAGTAATATTCCCTCAGTCCTTTGTTCAACCGAAACCTACTGCTCATTCGGTTAATATGGTTGTTCCACCATCCATCGATCTAACTGGACTCGGAGTTTCAGAAGATGGTGAGAAAAATATTGGCGACCTTATGACAGTATATGATACTGATGTTCATCAAGACAGCAGGAATCTAAGTTCCGGTAATCACATAGCTCCGGTGTTAAATCAGAACATACCGCAACCTAGCAGGATTCAGCAGCAGCAGCAGCAACCTCAGAATTTCTTCGGCGGTCAAGGAATGGTGATGGAGGGAAACTTGTTTGAACAAACCAACATGTCGAATAATAACCATAACCATCATCACCACATGTTTGCAAGAGATCATGAAGGTCAATTTGACCGGTTCAAAGCTTTGAATTCTCCCTTTGAGAACAATCACAATCAACATCACAACAACAACAATAATAATAATAATTTCCATTTAATGTTTGGGTCCCCTCAGTGTGATTTAACATCCTTTGATTTTAAGGAGGATATGCATCATGGCCATGGAGTAGGCATTGATCCTATTCACAAACAGCAAGATATTTCAGTATGGTACCCTTGA 1947 0.4474 MMMMYDEMALSGDLDVFSAPVVEEDITARQTEPEAIVDEDFSDEEIDVEELEKRMWKDKMRLKRLKEQVKPKDGLDAAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAISKYQADNAIPGNNDGSNPIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPTGNEEWWPQIGLPKDQGRPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIVNQEEAIARELYPDYIPPFTSVGGSGSYATNDGTEYDVYGGDDGPNFDVEERKPENLLHASNIGMMERLRGVRLPIQQPSFPMNGEAVTNMDFMRKRKISGEFNMMMDQKVFTCEHSMCPYSEVRIGFQDRTSRDNHQLNCPYRATSSDYGGPSFHANEVKPVIFPQSFVQPKPTAHSVNMVVPPSIDLTGLGVSEDGEKNIGDLMTVYDTDVHQDSRNLSSGNHIAPVLNQNIPQPSRIQQQQQQPQNFFGGQGMVMEGNLFEQTNMSNNNHNHHHHMFARDHEGQFDRFKALNSPFENNHNQHHNNNNNNNNFHLMFGSPQCDLTSFDFKEDMHHGHGVGIDPIHKQQDISVWYP 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02646 648 FunFam Ethylene insensitive 3-like 1 81 159 - -
Trre6g02646 648 Gene3D - 173 306 IPR023278 GO:0003700|GO:0005634
Trre6g02646 648 MobiDBLite consensus disorder prediction 67 92 - -
Trre6g02646 648 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 4 626 IPR006957 GO:0003700|GO:0005634
Trre6g02646 648 FunFam Ethylene insensitive 3-like 1 170 306 - -
Trre6g02646 648 Gene3D - 81 158 IPR023278 GO:0003700|GO:0005634
Trre6g02646 648 Pfam Ethylene insensitive 3 49 296 IPR047091 GO:0003700
Trre6g02646 648 SUPERFAMILY DNA-binding domain of EIN3-like 175 299 IPR023278 GO:0003700|GO:0005634
Trre6g02646 648 Coils Coil 48 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02646 Trre-Chr6 23325669 23327615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02646 3 647 EIL Transcription Factor Family AT3G20770 58.232 0.0 703
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Trre6g02646 EIN3 1e-129 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02646 K14514 - gmx:100775868 967.222