Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02636 ATGGCAGCAACAACAACAAATGAAGCAGAAGGGAAACCTATAAGATGTAAAGCGGCGGTTGCAAGAAGACCTGGTGAGCCAATGGTGATTGAAGAGATCATTGTGGCACCACCAATGCCTCGCGAGGTTCGGATCCGTATTATATGTTCCTCTCTCTGCCATGTCGATCTCGCTTTTTCCAACATGCAGGACCCTCCTGGCATTTTCCCGAGAATTCTTGGTCATGAAGCAATTGGGGTTGTGGAAAGTGTAGGGAAGGATGTAAAAGGAGATACGGTTATTCCGATATTCCTACCAGATTGTGGGGAATGTAGAGATTGCAAATCAACCAAGAGCAACCTTTGTACTAATTTCCCATTCAAAGTTTCTCCTTGGATGCTAAGAAATGAGAACACCAGATTCACTGACCTAAACGGTGAGTTCATATATCATTTCATGTCTGTTTCAAGCTTCAGCGAGTACACTGTGGTTGACGTTGCCAATGTAACAAAGATTGACTCAAATATTCCTCCCGACAGGGCATGCCTTCTCAGTTGTGGTATCGGAGCGGGGGTAGGTGCTGCTTGGAAAACAGCAGGTGTGGAGCCAGGGTCTACAGTAGCTATTTTTGGACTAGGATCTATTGGATTAGCAGTTGCCGAGGGAGCCAGACTTTGTGGAGCAACTAAGATTATCGGTGTAGATGTCAACCCTGAAAAATCCGAAGTTGGAAAGAAGTTTGGGATCACAGACTTTGTGCATGCCGGAGAATCTAAGAACAAACCTGTGAGCCAGGTTATCATAGAGATGACTGACGGGGGAGCAGATTATTGCTTTGAATGTGTCGGTATGGCATCGTTGATGCATGAAGCATATGCTTCTTGTAGAAAGGGTTGGGGAAAAATAATTGTCTTAGGACTGGACAAACCTGAAGCAAGATTGAGCCTCAGTTGTAGTGAAGTCCTTCATGATGGGAAGACACTTCAGGGAAATTTATTTGGAGGACTCAAACCTAAGTCTCATGTATCCGTTCTACTCAAACGATACATGGACAAGGAACTGCAGTTGGATCAATTTCTCACTCATGAAGTGGAGTTTAAGGACATCAATAAAGCTTTTGACTTGTTGAAAAATGGACAATGTATTCGATGTGTGATTTGGATGGACAAATGA 1152 0.4384 MAATTTNEAEGKPIRCKAAVARRPGEPMVIEEIIVAPPMPREVRIRIICSSLCHVDLAFSNMQDPPGIFPRILGHEAIGVVESVGKDVKGDTVIPIFLPDCGECRDCKSTKSNLCTNFPFKVSPWMLRNENTRFTDLNGEFIYHFMSVSSFSEYTVVDVANVTKIDSNIPPDRACLLSCGIGAGVGAAWKTAGVEPGSTVAIFGLGSIGLAVAEGARLCGATKIIGVDVNPEKSEVGKKFGITDFVHAGESKNKPVSQVIIEMTDGGADYCFECVGMASLMHEAYASCRKGWGKIIVLGLDKPEARLSLSCSEVLHDGKTLQGNLFGGLKPKSHVSVLLKRYMDKELQLDQFLTHEVEFKDINKAFDLLKNGQCIRCVIWMDK 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02636 383 FunFam Alcohol dehydrogenase 6 19 195 - -
Trre6g02636 383 Pfam Alcohol dehydrogenase GroES-like domain 41 164 IPR013154 -
Trre6g02636 383 SUPERFAMILY GroES-like 10 186 IPR011032 -
Trre6g02636 383 SUPERFAMILY GroES-like 333 380 IPR011032 -
Trre6g02636 383 Gene3D - 184 324 - -
Trre6g02636 383 Gene3D - 19 376 - -
Trre6g02636 383 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 74 88 IPR002328 GO:0008270|GO:0016491
Trre6g02636 383 PANTHER ALCOHOL DEHYDROGENASE 11 379 - -
Trre6g02636 383 FunFam S-(hydroxymethyl)glutathione dehydrogenase 184 324 - -
Trre6g02636 383 Pfam Zinc-binding dehydrogenase 208 328 IPR013149 -
Trre6g02636 383 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 169 344 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02636 Trre-Chr6 23247066 23250386 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02636 41 330 Monolignol Biosynthesis Gene Families AT4G37990 23.649 1.35e-10 60.5