Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02583 ATGGGTGGCATAGGAAAGACCACTCTAGCTAAAGATTTATATGTTAACATGTGTTCTCAATTTGATCTTCATTGCTTCATCGGAAATGTAAGGGAAGAATCAATCAGGTGTGGACTCAATGTTGTACGTAACAAACTTCTTACTACATTGTTGGAACTTAAACACTACGCACCTTACGTAGAAACCCCAATTTTCAAAAGAAAACTTGCATGTGAAAAAAGTTTAATTGTGTTGGATGATGTGGCAACTTTAGAGCAAGCAGAGAATTTGAACAATATCTGCTTGGGACCGGGTAGTAGAGTCATTGTCACAACTAGAGACAAGCAAATATTTAGTCAATTTGATGAGTGTCTAATTTATGAGGTTGAAGGATTGGACAAAAATAACTCTCTTCAACTATTTTGTTGGCATGCCTTCCGGACAAAACATGCTAAAGATGGATATGAAGCGCTCTTAGAAAGGGCAATTGGGTATTGCGGAGGCAATCCTCTGGCTTTAAAAGTCTTAGGTGCGAGTTTCCGTATAAAAAGCAAAGAAGTCTGGGAAAGTGAATTGGAGAAGCTCAAAGAGATTCCTAATAGAAAAATTCAGGATGTGTTAAGATTGAGTTTCGATGATTTAGATCGTACTCAACAAGACATATTTCTAGACATTGCATGCTTCTTTGGCTCTAAGGCATCTAATATTCATTATAGTCACAATGGTTACCTAACAGATATATTAGAAGCTTGCAAATTTTTTGCAGTAAGTGGGATAGATGTCCTTGTAAATAATGCACTCATAACTCGTAATGATGATGATGATTCAATTGAAATGCATGATTTGTTAGTAGAAATGGGACGAACGATTGTTAATGAAGCATCTCCTAAAGATCCCGGAAGAAGAAGTCGATTGTGGAATTCTGAGGATGTGTGTGATGTATTGAAATATAACAAGGGAACTGAAGTTGTTGAAGTTATAAGTTTCAATATCAATACTTCTAAAACTGAGGATCTATCCTTGAGCTCAGATTCCTTTAGAAGCATGATCAACTTAAGATATCTTTATATCACCTATCATGTGCACTTCCCTAAAGGTCTTGAATGGTTATCTGATAAATTGAGGTACCTTCATTGGGATGCATTTCCACTTAAGTCTTTACCATCGACCTTTTGTGCTGAAAAGCTTGTAGTACTTAGAATGGCCAATAGCAAGCTTAGAAAGCTTTGGGATGGAGTTCAGAACTTGGACAATTTAATGATGATTGATCTTGAATACTCCGAAGACTTGATTGAGATCCCAGACTTATCAAGGGCACCAAATCTTCAAATAGTGCATCTTTCTTGTTGTTGGAGTCTCCGTCAACTCCATCCATCCGTTCTCACTCGCTCCAAGCTTAGAGAACTGGATTTAAGTCATTGCAGTAAGATTAAAAGCCTGAAAACTGACATTCATTCAAAATCTCTCAAAGTACTCAATCTCTCTAATTGCTATTCTCTTGTTGAATTTTCGGTGACATCGGAGGAAATGACGTGGTTGTCGTTAAAAGGCACCGCTGTACATGAATTTCCTTCATGGATGTGGCGTAATAGCAAGCTCATTCATCTCAATCTAAGTGAATGTAAGAAGCTTAAGATTGTTAGGAAGAAGTTATCAACTGATCTAGGATTGAGGTCTCTTACATATTTGAACCTTTTAGGATGCACTGAAATCAGTACATTGAATTTGTGGTTCATCCTTGATGGCATGCCATCTTTGAAAGATCTAGTTTTGAGAAGGTGCTGCAACTTAGAAACTCTCCCCAATAACATCGAAAACAATTCATTGTTGGAAATTCTGAATTTAGATGAATGCAGTAAACTGAAGTCCCTACCAAAGCTTCCTACATCCTTGAAACAATTGACAGCTGTTAACTGCACTTATCTAGACACAAACATATTACACAGATTCCACTTCAGTAAAGATTCCGATACAGGCTTCAAGAAAGAATATGATCCTTTAAAAGTCTGTTACCTTCCAGGTGGCCAAGTTCCCTGCGAGTTTGATTATCAGACAACAAAGGCTTCAATAGACATCCCCCCTATTCCAAAATCTGGCTTGTGTGGTTTCATTTTTTGCATCGTTCTCTCTAAGGGATTAATTAATTTTCGTCAGCAAAGAGTAGATTGTACTATCTATGAGCATGGAAAAGAAATCCTTTACTTGAAAGAACTTTTTGTCATTCATGATACTTTTGGAAATGGAGAGGCAGAGACATTAATTTTAGATCATGTATTTTTATGTTCGTGGTCTGGTGATAATTACAATTTGGTGAATATGGGGAATGAAAGTGATCATTACAACCTTTCATTTGAATTCAATCATTTGGATCCTAAAGGGATGTACTATCATTATGGCATGGAAGAATGGTCAAGTAAGGGGATAAAGGGTTGTGGTGTCTTCCCTGTATATGCTTTGAAACATAATGGAGTTGAAATTGTTGAATTACAATCCAGTGCTCAATTCTCTCATGAGTCTGATATTGATGAGTCTGAAATCGATGAAAATGTTGAAGATGATTCTGAATCTGATAGAGTTGAAATTGTTGAACTACAATTCACATCCAGTGCTCAAGTCTCTGATGAGTCTGATCAACATTTGAAATTTGATATTGATGATTCACAAAACCAAAGCTCTACAGATGAAAATGAAAATGAACATCAGCAAATTAATATTCCCTATTACAGTATATAG 2712 0.3647 MGGIGKTTLAKDLYVNMCSQFDLHCFIGNVREESIRCGLNVVRNKLLTTLLELKHYAPYVETPIFKRKLACEKSLIVLDDVATLEQAENLNNICLGPGSRVIVTTRDKQIFSQFDECLIYEVEGLDKNNSLQLFCWHAFRTKHAKDGYEALLERAIGYCGGNPLALKVLGASFRIKSKEVWESELEKLKEIPNRKIQDVLRLSFDDLDRTQQDIFLDIACFFGSKASNIHYSHNGYLTDILEACKFFAVSGIDVLVNNALITRNDDDDSIEMHDLLVEMGRTIVNEASPKDPGRRSRLWNSEDVCDVLKYNKGTEVVEVISFNINTSKTEDLSLSSDSFRSMINLRYLYITYHVHFPKGLEWLSDKLRYLHWDAFPLKSLPSTFCAEKLVVLRMANSKLRKLWDGVQNLDNLMMIDLEYSEDLIEIPDLSRAPNLQIVHLSCCWSLRQLHPSVLTRSKLRELDLSHCSKIKSLKTDIHSKSLKVLNLSNCYSLVEFSVTSEEMTWLSLKGTAVHEFPSWMWRNSKLIHLNLSECKKLKIVRKKLSTDLGLRSLTYLNLLGCTEISTLNLWFILDGMPSLKDLVLRRCCNLETLPNNIENNSLLEILNLDECSKLKSLPKLPTSLKQLTAVNCTYLDTNILHRFHFSKDSDTGFKKEYDPLKVCYLPGGQVPCEFDYQTTKASIDIPPIPKSGLCGFIFCIVLSKGLINFRQQRVDCTIYEHGKEILYLKELFVIHDTFGNGEAETLILDHVFLCSWSGDNYNLVNMGNESDHYNLSFEFNHLDPKGMYYHYGMEEWSSKGIKGCGVFPVYALKHNGVEIVELQSSAQFSHESDIDESEIDENVEDDSESDRVEIVELQFTSSAQVSDESDQHLKFDIDDSQNQSSTDENENEHQQINIPYYSI 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02583 903 Pfam NB-ARC domain 1 190 IPR002182 GO:0043531
Trre6g02583 903 Pfam Leucine Rich Repeat 388 407 IPR011713 -
Trre6g02583 903 MobiDBLite consensus disorder prediction 860 903 - -
Trre6g02583 903 Gene3D Ribonuclease Inhibitor 479 642 IPR032675 -
Trre6g02583 903 Gene3D Ribonuclease Inhibitor 308 478 IPR032675 -
Trre6g02583 903 MobiDBLite consensus disorder prediction 830 849 - -
Trre6g02583 903 Gene3D - 124 208 IPR042197 -
Trre6g02583 903 SUPERFAMILY L domain-like 272 636 - -
Trre6g02583 903 Gene3D - 1 118 IPR027417 -
Trre6g02583 903 MobiDBLite consensus disorder prediction 878 903 - -
Trre6g02583 903 PRINTS Disease resistance protein signature 68 82 - -
Trre6g02583 903 PRINTS Disease resistance protein signature 477 493 - -
Trre6g02583 903 PRINTS Disease resistance protein signature 159 173 - -
Trre6g02583 903 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 537 IPR044974 GO:0006952
Trre6g02583 903 MobiDBLite consensus disorder prediction 834 849 - -
Trre6g02583 903 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 218 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02583 Trre-Chr6 22755687 22758804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02583 1 630 WRKY Transcription Factor Family AT5G45050 31.118 7.21e-69 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02583 - - cam:101499873 783.867