Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre6g02565 | ATGGCCACTATCGGCGTGCAACATCTTCCTCCCCCGTTAACTTCAACTTCAGAACCACCTCCTCTTTTTGATGGAACCACCAGGTTGTACATTAGTTACAGTTGCCCCTATGCACAACGTGTATGGATCACTAGGAACTACAAGGGTTTACAAGACAAGATCCATTTGGTACCTATTGACCTTCAAAACAGGCCTGCTTGGTATAAGGAAAAAGTGTATTCTGAAAATAAGGTACCATCTTTGGAGCACAATGGCAAGGTATTGGGAGAAAGTCTTGATTTGATCAAATATGTTGATGCTAACTTTGAAGGAACACCTCTCTTTCCTAATGATCCTGCCAAGAAAGAGTTCGGTGAGCAGTTGTTATCCCATGTTGATACATTCACCAAAGAGCTGTTTGTTTCATTGAAAGGAGATGTTGTGCAACAAACCAGCCCTACTTTTGAATTCTTGGAGAATGCTCTTGGCAAATTTGATGACGGGCCATTCCTTCTTGGTCAATTCAGTTTGGTTGATGTTGCCTATATTCCATTTGTTGAAAGATTCAATATCGTCCTTGCTGAAATTTTCAAGCATGACATTACCGAAGGAAGGCCTAAACTCGCAACATGGATCGAGGAGTTGAACAAGATTGATGCTTATACACAGACAAGAGTGGATCCTCAAGAAATTGTTGAAACTTTCAAGAACCGTTTTCTGGTACGAAATTCGTTGTTATAA | 720 | 0.4069 | MATIGVQHLPPPLTSTSEPPPLFDGTTRLYISYSCPYAQRVWITRNYKGLQDKIHLVPIDLQNRPAWYKEKVYSENKVPSLEHNGKVLGESLDLIKYVDANFEGTPLFPNDPAKKEFGEQLLSHVDTFTKELFVSLKGDVVQQTSPTFEFLENALGKFDDGPFLLGQFSLVDVAYIPFVERFNIVLAEIFKHDITEGRPKLATWIEELNKIDAYTQTRVDPQEIVETFKNRFLVRNSLL | 239 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre6g02565 | 239 | Gene3D | - | 104 | 236 | - | - | |
Trre6g02565 | 239 | FunFam | Lambda class glutathione S-transferase | 104 | 235 | - | - | |
Trre6g02565 | 239 | Pfam | Glutathione S-transferase, N-terminal domain | 29 | 105 | IPR004045 | - | |
Trre6g02565 | 239 | PANTHER | GLUTATHIONE S-TRANSFERASE L1 | 7 | 232 | IPR044629 | GO:0004364 | |
Trre6g02565 | 239 | SUPERFAMILY | GST C-terminal domain-like | 102 | 232 | IPR036282 | - | |
Trre6g02565 | 239 | Gene3D | Glutaredoxin | 2 | 103 | - | - | |
Trre6g02565 | 239 | Pfam | Glutathione S-transferase, C-terminal domain | 140 | 206 | - | - | |
Trre6g02565 | 239 | CDD | GST_C_Lambda | 111 | 229 | - | - | |
Trre6g02565 | 239 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 25 | 106 | IPR004045 | - | |
Trre6g02565 | 239 | SUPERFAMILY | Thioredoxin-like | 18 | 107 | IPR036249 | - | |
Trre6g02565 | 239 | FunFam | Glutathione S-transferase L2, chloroplastic | 1 | 103 | - | - | |
Trre6g02565 | 239 | SFLD | Glutathione Transferase (cytosolic) | 29 | 208 | IPR040079 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre6g02565 | Trre-Chr6 | 22585373 | 22587747 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre6g02565 | 4 | 233 | Glutathione S-transferase Gene Family | AT5G02790 | 68.261 | 3.83e-120 | 340 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre6g02565 | K00799 | - | gmx:547597 | 414.846 |