Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02565 ATGGCCACTATCGGCGTGCAACATCTTCCTCCCCCGTTAACTTCAACTTCAGAACCACCTCCTCTTTTTGATGGAACCACCAGGTTGTACATTAGTTACAGTTGCCCCTATGCACAACGTGTATGGATCACTAGGAACTACAAGGGTTTACAAGACAAGATCCATTTGGTACCTATTGACCTTCAAAACAGGCCTGCTTGGTATAAGGAAAAAGTGTATTCTGAAAATAAGGTACCATCTTTGGAGCACAATGGCAAGGTATTGGGAGAAAGTCTTGATTTGATCAAATATGTTGATGCTAACTTTGAAGGAACACCTCTCTTTCCTAATGATCCTGCCAAGAAAGAGTTCGGTGAGCAGTTGTTATCCCATGTTGATACATTCACCAAAGAGCTGTTTGTTTCATTGAAAGGAGATGTTGTGCAACAAACCAGCCCTACTTTTGAATTCTTGGAGAATGCTCTTGGCAAATTTGATGACGGGCCATTCCTTCTTGGTCAATTCAGTTTGGTTGATGTTGCCTATATTCCATTTGTTGAAAGATTCAATATCGTCCTTGCTGAAATTTTCAAGCATGACATTACCGAAGGAAGGCCTAAACTCGCAACATGGATCGAGGAGTTGAACAAGATTGATGCTTATACACAGACAAGAGTGGATCCTCAAGAAATTGTTGAAACTTTCAAGAACCGTTTTCTGGTACGAAATTCGTTGTTATAA 720 0.4069 MATIGVQHLPPPLTSTSEPPPLFDGTTRLYISYSCPYAQRVWITRNYKGLQDKIHLVPIDLQNRPAWYKEKVYSENKVPSLEHNGKVLGESLDLIKYVDANFEGTPLFPNDPAKKEFGEQLLSHVDTFTKELFVSLKGDVVQQTSPTFEFLENALGKFDDGPFLLGQFSLVDVAYIPFVERFNIVLAEIFKHDITEGRPKLATWIEELNKIDAYTQTRVDPQEIVETFKNRFLVRNSLL 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02565 239 Gene3D - 104 236 - -
Trre6g02565 239 FunFam Lambda class glutathione S-transferase 104 235 - -
Trre6g02565 239 Pfam Glutathione S-transferase, N-terminal domain 29 105 IPR004045 -
Trre6g02565 239 PANTHER GLUTATHIONE S-TRANSFERASE L1 7 232 IPR044629 GO:0004364
Trre6g02565 239 SUPERFAMILY GST C-terminal domain-like 102 232 IPR036282 -
Trre6g02565 239 Gene3D Glutaredoxin 2 103 - -
Trre6g02565 239 Pfam Glutathione S-transferase, C-terminal domain 140 206 - -
Trre6g02565 239 CDD GST_C_Lambda 111 229 - -
Trre6g02565 239 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 25 106 IPR004045 -
Trre6g02565 239 SUPERFAMILY Thioredoxin-like 18 107 IPR036249 -
Trre6g02565 239 FunFam Glutathione S-transferase L2, chloroplastic 1 103 - -
Trre6g02565 239 SFLD Glutathione Transferase (cytosolic) 29 208 IPR040079 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02565 Trre-Chr6 22585373 22587747 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02565 4 233 Glutathione S-transferase Gene Family AT5G02790 68.261 3.83e-120 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02565 K00799 - gmx:547597 414.846