Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02556 ATGGCCACTATCGGCGTGCAACATCTTCCTCCCCCGTTAACTTCAACTTCAGAACCACCTCCTCTTTTTGATGGAACCACCAGGTTGTACATTAGTTACAGTTGCCCCTATGCACAACGTGTATGGATCACTAGGAACTACAAGGGTTTACAAGACAAGATCCATTTGGTACCTATTGACCTTCAAAACAGGCCTGCTTGGTATAAGGAAAAAGTGTATTCTGAAAATAAGGTACCATCTTTGGAGCACAATGGCAAGGTATTGGGAGAAAGTCTTGATTTGATCAAATATGTTGATGCTAACTTTGAAGGAACACCTCTCTTTCCTAATGATCCTGCCAAGAAAGAGTTCGGTGAGCAGTTGTTATCCCATGTTGATACATTCACCAAAGAGCTGTTTGTTTCATTGAAAGGAGATGTTGTGCAACAAACCAGCCCTACTTTTGAATTCTTGGAGAATGCTCTTGGCAAATTTGATGACGGGCCATTCCTTCTTGGTCAATTCAGTTTGGTTGATGTTGCCTATATTCCATTTGTTGAAAGATTCAATATCGTCCTTGCTGAAATTTTCAAGCATGACATTACCGAAGGAAGGCCTAAACTCGCAACATGGATCGAGGAGTTGAACAAGATTGATGCTTATACACAGACAAGAGTGGATCCTCAAGAAATTGTTGAAACTTTCAAGAACCGTTTTCTGCCTCAACATTGA 711 0.4107 MATIGVQHLPPPLTSTSEPPPLFDGTTRLYISYSCPYAQRVWITRNYKGLQDKIHLVPIDLQNRPAWYKEKVYSENKVPSLEHNGKVLGESLDLIKYVDANFEGTPLFPNDPAKKEFGEQLLSHVDTFTKELFVSLKGDVVQQTSPTFEFLENALGKFDDGPFLLGQFSLVDVAYIPFVERFNIVLAEIFKHDITEGRPKLATWIEELNKIDAYTQTRVDPQEIVETFKNRFLPQH 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02556 236 FunFam Lambda class glutathione S-transferase 104 235 - -
Trre6g02556 236 SUPERFAMILY GST C-terminal domain-like 102 232 IPR036282 -
Trre6g02556 236 SFLD Glutathione Transferase (cytosolic) 29 208 IPR040079 -
Trre6g02556 236 CDD GST_C_Lambda 111 229 - -
Trre6g02556 236 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 25 106 IPR004045 -
Trre6g02556 236 SUPERFAMILY Thioredoxin-like 18 107 IPR036249 -
Trre6g02556 236 Pfam Glutathione S-transferase, N-terminal domain 29 105 IPR004045 -
Trre6g02556 236 Pfam Glutathione S-transferase, C-terminal domain 140 206 - -
Trre6g02556 236 Gene3D - 104 235 - -
Trre6g02556 236 Gene3D Glutaredoxin 2 103 - -
Trre6g02556 236 PANTHER GLUTATHIONE S-TRANSFERASE L1 7 232 IPR044629 GO:0004364
Trre6g02556 236 FunFam Glutathione S-transferase L2, chloroplastic 1 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02556 Trre-Chr6 22495556 22498032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02556 4 233 Glutathione S-transferase Gene Family AT5G02790 68.261 4.20e-120 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02556 K00799 - gmx:547597 419.468