Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02501 ATGCCTTACAGCAACCTTCAAAAGCTTTGGGACGGAGTTCAGAATCTTGCGAATTTAAAGGAAATTGACCTTAGATTCAGCAATGAGTTGGTTGAGGTCCCGGACTTGTCTAAGGCTACGAATTTGGAATGCAACTGCTCATCTCTGAAAGAATTCTCCGTCACTTCAAACAAACTCGAGAAACTGTGGTTAGATGTTACATCTATCCAAGAATTGCCCTCATCAATTTGGTGTTGCCAGAAACTGAAGATGATTGATCTTCACAATTGTGACAATCTTGTTGGTTTTGGGGAAAATAAAAACCATATAGAAATTGGATCTCTTAATACTCTGGTTCTTTCTGGCTGCAAAAAACTCAATGCATCAAATCTTTGTTTCAGCTTCAAAGCATGGCAATCAACTTTAACATCATTGAATTTGGAAAATTGTTGCAATTTAGAGGCACTCCCTGATAGCATTGGTTTATTATCATCATTGCAATGTTTAAATCTAAGTGGAAGCAATGTTGAGAGATTGTCACCAAATATAAAAAATCTTCACAACCTTAAAGAGCTAAGTTGA 561 0.3672 MPYSNLQKLWDGVQNLANLKEIDLRFSNELVEVPDLSKATNLECNCSSLKEFSVTSNKLEKLWLDVTSIQELPSSIWCCQKLKMIDLHNCDNLVGFGENKNHIEIGSLNTLVLSGCKKLNASNLCFSFKAWQSTLTSLNLENCCNLEALPDSIGLLSSLQCLNLSGSNVERLSPNIKNLHNLKELS 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02501 186 Gene3D Ribonuclease Inhibitor 1 186 IPR032675 -
Trre6g02501 186 SUPERFAMILY L domain-like 3 185 - -
Trre6g02501 186 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 107 186 - -
Trre6g02501 186 Pfam Leucine Rich Repeat 1 14 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02501 Trre-Chr6 22009966 22011520 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02501 1 185 WRKY Transcription Factor Family AT4G12020 26.230 3.90e-10 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02501 - - mtr:25491119 259.61