Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02453 ATGGATTTAAACACCCCAATACGATCCAACACCACGCCCCTCTCCAGCCCAGTCTTCAAATCTAAACTTATTTGCTTACATGAATGGTGGCTCATGAAGCCTCAAAACCAGTGCAAGGGTTTAGCTCTTGCTGGCATTGCTTCAATGGAGAGAGAAAGAATGTTTTTTTCCTCTGTGATTGTAAAGAGACATGAACCCAATGTTGTAGAGACTGATGATGGCGTCACAATAATCTTCCGTGGTTTTATTAACTCCTCTCGTACATCTCAAAATGGATTTCCCTCCGATGTATGTCACCGGTTCTCTGTTGGATTCCCACACAATTGGAAAAATTATTCAGCTCACAGTTCAGGAAATGAATGTCAATATGTGGATAGAGTTACCAGTTTTGATGACTCAAATGCTTCTTCCCACAAAAAAACAGTTGATGAGACTTCTCATGAAGCTATGGAAGCCGAAGATAACGAGAATATTGCGAGTATTAAGTTGTCTCAACTGCAGGTTGGCGTGGTTTATAATGGTGAAAATATAGTCTCAGATGTTAACGGCTTAAATGCTTCTTGCCATAAAAAGACAGCTGATGTGTCTTCACATGAAGCTATAGAAGCTGAAGATAACAACAATATCGGGGGTCTTGGGTTATCTCAACCGCAGGTTGATTTGATTAATAATGGCGACAATGGAGTCTCAATTACTGCTGCAGCCGAAAGTAATCAATCTTTGATGGGTGTGTTTGATTTTGATCCTATCCATGAGCAAAGCAATGTTAGGTCTCCACTTTACCCAAAGAAATTGGAATTTGAACAGTTATCAAGTGATCGCAAGGAGAAAAAACGTATCAAGAAGAAGATTGTAGAGGATACTAGTAGTTTGTGTAGTAGGGTCCTGACAAGAAGCATGGCCAAAAAAAGTCGCATGATGCTTAAAAGGGATGAGAAAGCTGAAGTAAAATCTTCTAGTTGTCCTGTTACAAGATCTCCTAGGATACATAATTATAAAAATAAATGA 1008 0.3929 MDLNTPIRSNTTPLSSPVFKSKLICLHEWWLMKPQNQCKGLALAGIASMERERMFFSSVIVKRHEPNVVETDDGVTIIFRGFINSSRTSQNGFPSDVCHRFSVGFPHNWKNYSAHSSGNECQYVDRVTSFDDSNASSHKKTVDETSHEAMEAEDNENIASIKLSQLQVGVVYNGENIVSDVNGLNASCHKKTADVSSHEAIEAEDNNNIGGLGLSQPQVDLINNGDNGVSITAAAESNQSLMGVFDFDPIHEQSNVRSPLYPKKLEFEQLSSDRKEKKRIKKKIVEDTSSLCSRVLTRSMAKKSRMMLKRDEKAEVKSSSCPVTRSPRIHNYKNK 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02453 335 MobiDBLite consensus disorder prediction 131 150 - -
Trre6g02453 335 MobiDBLite consensus disorder prediction 304 318 - -
Trre6g02453 335 MobiDBLite consensus disorder prediction 132 150 - -
Trre6g02453 335 Pfam SANTA (SANT Associated) 24 112 IPR015216 -
Trre6g02453 335 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 19 332 - -
Trre6g02453 335 MobiDBLite consensus disorder prediction 303 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02453 Trre-Chr6 21361545 21363124 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Trre6g02453 SANTA 9.2e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02453 - - tpra:123906974 481.485