Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02433 ATGGGATTTAAAATTAATATCAAAGAATTTGTTTTGTCTATCTTGATCTTCCTTATAATTCCAACTCTAATAGCCGCAGAATGTACGTGCGATGAAGAAGATGGAGATAGAAATAAAACCAAAGCCCTACGTTACAAAATAGCGGCTTTAATATCGATATTAGTTGCAAGTGCAATTGGTGTTAGCATTCCACTTCTCGGAAAAGTGATACCCGCCTTAAGCCCCGAAAAAGATATATTTTTTATCATTAAAGCCTTTGCTGCCGGTGTGATATTGTCAACGGGTTTCATTCATGTACTTCCCGATGCTTTTGAGAATCTCACTTCACCTTGTTTAAAGGAACATCCTTGGGGAGATTTTCCATTCACCGGTTTCGTGGCTATGTGCACTGCTATGGGGACTCTTATGGTTGATACTTATGCCACTGCTTATTTTCAGAATCATTATACTAAAAAAGCACCAGCACAAGTTCAGAGTCATGGCCATGGGGTAACCTCAGATGTGGAGAAGGATGCAGAGCATGAAGGACATGTGCATGTTCATACTCATGCATCACATGGTCATTCACATGGCCCTATTTCTTCGCATCCATCATCAGAACTTCTTCGTCATAGAGTTATATCACAGGTATTGGAGTTGGGAATTATTGTTCACTCAGTTATAATAGGAATTTCTTTGGGTGCTTCAGAGAGTCCTAAAACCATAAGACCACTTGTAGCTGCGTTAACTTTTCATCAATTTTTTGAGGGCATGGGACTTGGAAGTTGTATAACTCAGGCAAATTTCAAGAGTCTATCAATTACAATCATGGGATTGTTCTTTGCTTTGACAACTCCAGTAGGGATTGGAATTGGTATAGGGATCAGCAGTGTTTATGATGAGAACAGTCCAACCGCACTTATTGTTGAAGGAGTCTTCAATGCAGCTTCAGCTGGAATCTTAATCTATATGGCACTTGTTGATCTTCTTGCAGCTGATTTTATGAATCCAAGAATGCAAAAGAGTGGTAGGCTTAGATTAGGATGCAATCTATCTCTTCTACTAGGAGCTGGTTGTATGTCTCTTATAGCCAAATGGGCTTAG 1083 0.3952 MGFKINIKEFVLSILIFLIIPTLIAAECTCDEEDGDRNKTKALRYKIAALISILVASAIGVSIPLLGKVIPALSPEKDIFFIIKAFAAGVILSTGFIHVLPDAFENLTSPCLKEHPWGDFPFTGFVAMCTAMGTLMVDTYATAYFQNHYTKKAPAQVQSHGHGVTSDVEKDAEHEGHVHVHTHASHGHSHGPISSHPSSELLRHRVISQVLELGIIVHSVIIGISLGASESPKTIRPLVAALTFHQFFEGMGLGSCITQANFKSLSITIMGLFFALTTPVGIGIGIGISSVYDENSPTALIVEGVFNAASAGILIYMALVDLLAADFMNPRMQKSGRLRLGCNLSLLLGAGCMSLIAKWA 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02433 360 Pfam ZIP Zinc transporter 44 357 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Trre6g02433 360 NCBIfam ZIP zinc/iron transport family 28 360 IPR004698 GO:0005385|GO:0016020|GO:0071577
Trre6g02433 360 PANTHER ZINC/IRON TRANSPORTER 42 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02433 Trre-Chr6 21160186 21162534 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02433 14 360 Inorganic Solute Cotransporters AT3G12750 56.286 2.37e-136 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02433 K14709 - gmx:547695 508.449