Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02432 ATGGGATTTAAAATTAATATAAAAGAATTTGTTTTGTCTATCTTGATCTTCTTCATAGTTCCAACTCTAATAGCAGCGGAATGTACGTGCGATGAAGAAGATGGAGATAGAGACAAAACGAAAGCCCTACGTTACAAAATAGCGGCTTTAGTATCGATACTAGTTGCAAGTGCAATTGGTGTTTGCATTCCACTTCTTGGAAAAGTGATACCCGCCTTAAGCCCAGAAAAAGATATATTTTTTATCATCAAAGCCTTTGCTGCCGGTGTGATATTGTCCACCGGTTTCATTCATGTACTTCCTGATGCTTTCGAGAATCTCACTTCACCTTGTTTAAATGAACATCCTTGGGGAGATTTTCCATTCACCGGTTTCGTGGCTATGTGCACTGCTATGGGGACTCTTATGGTTGATACTTATGCAACTGCTTATTTTCAGAACCATTATACTAAAAAAGCACCGACACAAGTTGAGAGTCATGGCGATGGGGCAACCTCAGATGTGGAGCATGAAGGACATGTGCATGTTCATACTCATGCATCACATGGTCATTCACATGGCCCTATTGCTTCGCATCCATCATCAGAACTTCTTCGTCATAGAGTTATATCACAGGTATTGGAGTTGGGAATTATTGTTCACTCAGTTATAATAGGAATTTCTGTGGGTGCTTCAGAGAGTCCTAAAACCATAAGACCACTTGTAGCTGCGTTGACTTTTCATCAATTTTTTGAGGGCATGGGACTTGGAAGTTGCATAACCCAGGCAAATTTCAAGAGTCTATCAATCACAGTCATGGGATTGTTCTTTGCTTTGACAACTCCAGTAGGGATTGGAATTGGTATAGGGATCAGCAGTGTTTATGATGAGAACAGTCCAACTGCTCTTATTGTTGAAGGAGTCTTCAATGCAGCTTCAGCTGGAATCTTAATCTACATGGCACTTGTTGATCTTCTTGCAGCTGATTTTATGAATCCAAGAATGCAAAAGAGTGGTAGGCTTAGATTGGGATGCAATCTATCTCTTCTACTAGGAGCTGGTTGTATGTCACTTTTGGCCAAATGGGCTTAG 1071 0.4062 MGFKINIKEFVLSILIFFIVPTLIAAECTCDEEDGDRDKTKALRYKIAALVSILVASAIGVCIPLLGKVIPALSPEKDIFFIIKAFAAGVILSTGFIHVLPDAFENLTSPCLNEHPWGDFPFTGFVAMCTAMGTLMVDTYATAYFQNHYTKKAPTQVESHGDGATSDVEHEGHVHVHTHASHGHSHGPIASHPSSELLRHRVISQVLELGIIVHSVIIGISVGASESPKTIRPLVAALTFHQFFEGMGLGSCITQANFKSLSITVMGLFFALTTPVGIGIGIGISSVYDENSPTALIVEGVFNAASAGILIYMALVDLLAADFMNPRMQKSGRLRLGCNLSLLLGAGCMSLLAKWA 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02432 356 NCBIfam ZIP zinc/iron transport family 28 356 IPR004698 GO:0005385|GO:0016020|GO:0071577
Trre6g02432 356 PANTHER ZINC/IRON TRANSPORTER 42 350 - -
Trre6g02432 356 Pfam ZIP Zinc transporter 45 353 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02432 Trre-Chr6 21153996 21157076 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02432 25 356 Inorganic Solute Cotransporters AT3G12750 57.478 4.20e-135 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02432 K14709 - gmx:547695 520.005