Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02401 ATGGGGTCCCTTTACTTTCTCCTCATAATTCTTCTTGTCTCTCTACTTCACACACCAACTTTTGCAGTAAAAAAAAAGTCATATGTGGTATACTTAGGAAGCCATTCACATGATTCTTCAGAAATGTCTTCATTTGATTTCAATAGTGTAACAAATTCTCACTATGAGTTTCTAGGATCATTCTTGGGAAGTTCTGAAACAGCAAAAGAGTCAATTTTTTACTCTTACACAAGACATATAAATGGTTTTGCTGCAAATTTGGAAGAAGAAGTAGCAGCTGAGATATCAAAACATTCAAAAGTGATGTCAGTGTTTGAGAACAAAGGAAGGAAACTACATACAACTCGTTCATGGGGATTTATGGGGTTAGAAGATAATAATGGTGTGATTTCATCAAACTCAATATGGAACAAAGCCAGATTTGGTGATGGTGTCGTTATAGCAAACCTTGATACAGGTGTTTGGCCTGAATCTAAGAGCTTTAGTGATGAAGGGTTTGGACCAATTCCATCAAAGTGGAGAGGAATATGTGATAAAGGGAGTGATCATGGTTTTCACTGCAATAGGAAACTAATTGGGGCAAGGTATTTCAACAAAGGCTATAAATCAAGAGTAACTACCCCGCTAAACTCAACCTTTGAGACACCTCGCGACAACGAAGGCCATGGATCACACACACTTTCAACAGCAGGTGGAAACATGGTACAAAGTGTAAGTGTCTTTGGTCAAGGAAATGGAACAGCAAAGGGTGGTTCACCAAGAGCAAGAGTTGCATCATACAAAGTTTGTTGGCCTCCGGTTGACGGTGATGAATGTTTTGAAGCAGACATACTTGCAGCTTTTGATATGGCTATTCATGATGGTGTTGATGTCTTGTCTGTGTCACTTGGTGGTTCTGCTTCTAACCTTTTTAATGATAGTGTTGCTATTGGATCTTTTCATGCTGCTAAGAAAGGTATTGTTGTTGTTTGTTCTGCTGGAAATAGTGGACCAAATGAAGCTACTGCAGAAAATCTTGCTCCTTGGTATATTACAGTTGGTGCTAGCACAATGGATAGAGAGTTCTCTAGTTATGTTGTTCTTGGTAACAATTTAAGGCTTAAGGGAGAAAGTTTATCAGCTACAAGATTAGCACACAAATCCTACCCAATCATTAAAGCAACAGATGCTAAATTAGCAACTGCAACAAATCAAGACGCTGTACTTTGCCAGAATGGAACACTGGACCCTAACAAGGTGAAGGGTAAAATAGTATTATGCCTGAGAGGAATAAATGCTAGAGTGGACAAAGGAGAACAAGCTCTTCTAGCTGGTGCTGTAGGAATGGTTCTTGCCAATGATATCACTACTGCAAATGAAATTCTAGCCGATCCTCATGTTCTTCCCGCTTCGCACATAAATTTCTCTGATGGTGTAGAAGTCTTCAATTACATCAACTCAACCAAGTCTCCAGTGGCTTATATTACATATCCAGCAACAAAATTGCATACTAAACCAGCCCCTTTCATGGCAGCATTTTCATCCAAAGGACCAAACACTATTGTACCTGAGATTCTAAAGCCTGATATTACTGCACCAGGAGTGTCAGTTATAGCAGCCTACACTGAAGCTGAAGGACCAACTGACCAAGAGTTCGACAAACGCCGGATTCAATTTAACTCAATCTCTGGCACATCGATGTCATGTCCTCACATTTCGGGCATTGTTGGCCTTTTGAAAGCGTTGTATCCTTCTTGGAGTCCTGCTGCTATCAAATCAGCTATCATGACCACAGCTACAACATTAGACAACGAGGCGGAGACAATTCTGAATGCTACCTACAGCCACACGACACCATTTAGCTACGGATCAGGACATGTTCAACCAAACAAAGCAATGGATCCCGGTCTTGTTTATGACACAACATTCAATGATTACTTCAACTTCTTATGTGCTTTAGGCTACAATGAAACACAAATTTCAGTGTTTTTAAAAGCTCCTCACCAATGTCATAAAAATTTTAGTATCATCAACCTAAACTATCCTTCAATCACTGTTCCAAATCTCTCTCGGTCCGTGAAGGTTACAAGGACATTAAAAAATGTTGGTGCTCCAGCAACATACATTGTTCATGTTCAGAATCCAAATGGGATAACTGTTTCTGTGAAGCCAAATATATTGGAGTTCAAACATGTTGGTGAAGAGAAGAAGTTTGAGGTAAAATTGAAGGTGAAGAAAGGAAAAGCAACAAAGAATTATGTGTTTGGAAAGATGGTTTGGTCAGATGGGAAACATTATGTTAAGAGTCCAATAGTTGTGAAAGCTATCTAG 2310 0.3939 MGSLYFLLIILLVSLLHTPTFAVKKKSYVVYLGSHSHDSSEMSSFDFNSVTNSHYEFLGSFLGSSETAKESIFYSYTRHINGFAANLEEEVAAEISKHSKVMSVFENKGRKLHTTRSWGFMGLEDNNGVISSNSIWNKARFGDGVVIANLDTGVWPESKSFSDEGFGPIPSKWRGICDKGSDHGFHCNRKLIGARYFNKGYKSRVTTPLNSTFETPRDNEGHGSHTLSTAGGNMVQSVSVFGQGNGTAKGGSPRARVASYKVCWPPVDGDECFEADILAAFDMAIHDGVDVLSVSLGGSASNLFNDSVAIGSFHAAKKGIVVVCSAGNSGPNEATAENLAPWYITVGASTMDREFSSYVVLGNNLRLKGESLSATRLAHKSYPIIKATDAKLATATNQDAVLCQNGTLDPNKVKGKIVLCLRGINARVDKGEQALLAGAVGMVLANDITTANEILADPHVLPASHINFSDGVEVFNYINSTKSPVAYITYPATKLHTKPAPFMAAFSSKGPNTIVPEILKPDITAPGVSVIAAYTEAEGPTDQEFDKRRIQFNSISGTSMSCPHISGIVGLLKALYPSWSPAAIKSAIMTTATTLDNEAETILNATYSHTTPFSYGSGHVQPNKAMDPGLVYDTTFNDYFNFLCALGYNETQISVFLKAPHQCHKNFSIINLNYPSITVPNLSRSVKVTRTLKNVGAPATYIVHVQNPNGITVSVKPNILEFKHVGEEKKFEVKLKVKKGKATKNYVFGKMVWSDGKHYVKSPIVVKAI 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02401 769 SUPERFAMILY Subtilisin-like 112 630 IPR036852 GO:0004252|GO:0006508
Trre6g02401 769 FunFam Subtilisin-like protease SBT5.3 17 113 - -
Trre6g02401 769 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Trre6g02401 769 PRINTS Subtilisin serine protease family (S8) signature 218 231 IPR015500 -
Trre6g02401 769 PRINTS Subtilisin serine protease family (S8) signature 556 572 IPR015500 -
Trre6g02401 769 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 40 766 IPR045051 -
Trre6g02401 769 Pfam Subtilase family 142 599 IPR000209 GO:0006508|GO:0008236
Trre6g02401 769 Gene3D - 352 496 - -
Trre6g02401 769 ProSiteProfiles Serine proteases, subtilase domain profile. 117 626 - -
Trre6g02401 769 Pfam PA domain 403 472 IPR003137 -
Trre6g02401 769 ProSitePatterns Serine proteases, subtilase family, serine active site. 557 567 IPR023828 -
Trre6g02401 769 Pfam Fibronectin type-III domain 671 766 IPR041469 -
Trre6g02401 769 SUPERFAMILY PA domain 398 481 IPR046450 -
Trre6g02401 769 Gene3D Peptidase S8/S53 domain 144 639 IPR036852 GO:0004252|GO:0006508
Trre6g02401 769 FunFam subtilisin-like protease SBT1.5 352 495 - -
Trre6g02401 769 CDD Peptidases_S8_3 111 593 IPR034197 -
Trre6g02401 769 CDD PA_subtilisin_like 358 488 - -
Trre6g02401 769 Gene3D - 643 769 - -
Trre6g02401 769 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 113 IPR037045 -
Trre6g02401 769 FunFam Subtilisin-like protease SBT1.5 144 364 - -
Trre6g02401 769 Pfam Peptidase inhibitor I9 27 113 IPR010259 -
Trre6g02401 769 FunFam Subtilisin-like protease SBT1.5 643 769 - -
Trre6g02401 769 MobiDBLite consensus disorder prediction 208 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02401 Trre-Chr6 20939615 20947343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02401 27 767 Subtilisin-like Serine Gene Family AT2G04160 64.516 0.0 973
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02401 - - gmx:100794807 1231.08