Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02328 ATGACTACACAGAACAATGTAGTAACACCTGAAATTAATTCATGTATTAATAATCTCATTTCTACCACGGTTTTACCAAGTGCAACAACTGTGCCAGAATCTATGACTATGCTTGGTGGGTTTTTGAATTTTTCTCATAATAATAATAATTTAATTAAGAGATTGGAAGGTAGTAAAGTTAATGCTTGGATTGATTCAATGAGAGCTGCTTCTCCTACTCGTACTATCAATAAATCTTCAGAAAATCAAGAAAAATGTTCTTGGATTCTTTATCATCCTTCAGCTTTGAAATTGTTTGATCAGATTTTGTATAGTGCAAAAGGAAAACAAATAGTAGTTTTTCTTGACTATGATGGTACTCTTTCTCCCATTGTTGCTGATCCAGATAAAGCTTTCATGACTAGAAAGATGAGAGGAACGCTTAAGGATATAGCAAGACATTTTCCAACAGCCATAGTGACAGGAAGGTGCAGAGACAAGGTGATTAACTTTGTAAAATTGGCAGAACTGTACTATGCAGCAAGCCATGGTATGGATATTATGGGACCAACTAAAAATCAAACTGCTGCTGAGAAAACTAACAAAGCAGTGTTGTTTCAACCTGCAAGTCAATTCCTACCAATGATTGATGAGGTGTACAAAATATTGTTAGAAAAAACAAAATCTGTCTCAGGAGCTAAGGTAGAGAACAACAAATTTTGTTTGTCCGTGCACTTCCGTTGTGTTGACGAAAAGAGTTGGGCTCCATTGGCGGAGAAAGTTAGATTGGTGCTAAATGAATACCCAAAACTTAAGCTAACACAAGGAAGAAAAGTGTTGGAGATTCGTCCCACCATCAAATGGGACAAAGGAAAAGCTCTTGAATTCTTGTTGGAATCATTAGGATATGAGAATTCTAATGATGTATTCCCAATCTATATTGGTGATGATCGTACCGATGAGGATGCATTTAAGGTTTTGCGAAGAAGGGACCAAGGGGTTGGGATTCTTGTTTCTAGTGTTCCAAAAGAAACAGATGCTTCTTACACACTTCAAGATCCACCAGAGGTTGAGCATTTTTTGCGGCGATTAGTGGAGTGGAAAAGATCAAGCAGTAATGTGAACCCCAAGAGTGCATAG 1119 0.3718 MTTQNNVVTPEINSCINNLISTTVLPSATTVPESMTMLGGFLNFSHNNNNLIKRLEGSKVNAWIDSMRAASPTRTINKSSENQEKCSWILYHPSALKLFDQILYSAKGKQIVVFLDYDGTLSPIVADPDKAFMTRKMRGTLKDIARHFPTAIVTGRCRDKVINFVKLAELYYAASHGMDIMGPTKNQTAAEKTNKAVLFQPASQFLPMIDEVYKILLEKTKSVSGAKVENNKFCLSVHFRCVDEKSWAPLAEKVRLVLNEYPKLKLTQGRKVLEIRPTIKWDKGKALEFLLESLGYENSNDVFPIYIGDDRTDEDAFKVLRRRDQGVGILVSSVPKETDASYTLQDPPEVEHFLRRLVEWKRSSSNVNPKSA 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02328 372 CDD HAD_TPP 112 350 - -
Trre6g02328 372 FunFam Trehalose 6-phosphate phosphatase 208 367 - -
Trre6g02328 372 Gene3D - 218 371 IPR023214 -
Trre6g02328 372 Gene3D - 111 209 IPR023214 -
Trre6g02328 372 Pfam Trehalose-phosphatase 114 347 IPR003337 GO:0003824|GO:0005992
Trre6g02328 372 SUPERFAMILY HAD-like 112 360 IPR036412 -
Trre6g02328 372 NCBIfam trehalose-phosphatase 109 358 IPR003337 GO:0003824|GO:0005992
Trre6g02328 372 NCBIfam HAD-IIB family hydrolase 113 321 IPR006379 -
Trre6g02328 372 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 48 368 IPR044651 GO:0004805|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02328 Trre-Chr6 20171198 20174097 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02328 107 357 Trehalose Biosynthesis Gene Families AT1G70290 26.394 4.87e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02328 K01087 - gmx:100815979 575.474