Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02314 ATGGATTCTCCAACCGATAAAGATATGGAAAAAACTAAAATGGATGAGAGAAACTTATCACCTTCATACGATGAACCGCCGTATGCATACAAAGTTGCAATTCCTCCAAAACAGAACTTATTCAAGGAATTCCAATACACTGTAAAAGAAACATTATTTGCTGATGATCCTTTAAGATCTTTCAAAGACCAAACTAAATCAAGAAAGTTACTCCTTGGTATTGAGTTCATATTCCCTATACTTAATTGGGGGAGAAGTTACAATCTTAAAAAATTTAGGGGAGATATTATATCTGGTCTCACTATTGCAAGTCTTTGTATACCTCAGGATATTGGATATTCCAAGCTTGCACATTTGGCTCCACAGTATGGACTGTATTCAAGCTTTGTTCCACCATTGATATATGCTTTCATGGGTAGTTCTCGCGATATAGCAATAGGACCAGTGGCGGTGGTTTCTCTCTTGTTAGGGACATTGCTTAGTAATGAGATTGATCCTGTTACACATGCAGCAGAATATCAAAGACTTGCTTTTACAGCCACTTTTTTTGCTGGGATTACACAAGCAACACTCGGGGTTTTCAGGTTAGGGTTCTTGATTGATTTCCTATCCCATGCTGCTATTGTTGGTTTTATGGGGGGTGCTGCTATCACTATTGCCCTTCAACAGCTAAAAGGTTTCCTCGGCATTAAAACTAAAAATTTCACAACAAAAACAGATATTGTCAACGTGTTGCGTGCAGTATTCTCATCAGCCGAACACGGATGGAACTGGCAAACGATATTAATCGGAGCTAGCTTTTTGAGTTTTCTTCTGGTCGCCAAATTTATTGGAAAGAAAAACAAAAAACTCTTCTGGGTGCCAGCGATTGCGCCATTGATATCTGTTGTGTTGTCCACTTTTTTTGTATTCATAACACGCGCAGATAAGCAAGGAGTCGAAATTGTAAATCACATAGAGAAAGGGATCAATCCTTCATCGGTACATAAAATTTATTTTACCGGTGACTACCTTGGGAAAGGTTTTAAAATCGGCGTCACGGCAGGCATGATAGCACTAACTGAAGCCATAGCTATTGGGAGAACATTTGCATCTATGAAGGATTATCAATTGGATGGAAACAGAGAAATGGTGGCATTAGGAACAATGAATGTCGTTGGTTCGATGACTTCCTGTTATGTGGCAACTGGTTCTTTCTCTCGGTCCGCGGTAAACTACATGGCTGGCTGCCAAACTGCAGTCTCGAATATCGTGATGTCAGTGGTTGTGTTTTTAACACTACAATTCATAACTCCTCTTTTTAAGTACACTCCAAATGCCATTCTCGCCTCCATCATCATTTCTGCTGTCATCAGCCTTGTGGACTATCAGGCAGCAATTTTGATTTGGAAGATTGATAAATTCGATTTCGTTGCGTGCATGGGAGCATTCTTTGGGGTTGTTTTCATCTCAGTTGAGATAGGACTTCTAATTGCTGTTTCAATATCTTTTGCAAAGATCCTATTACAAGTAACAAGACCAAGAACAGCTATTTTGGGAAAGATTCCTAGGACAACTGTCTATAGAAACATCCAACAATACCCTGAAGCTAGTAAGGTTCCTGGTGTAATGATTGTAAGAGTTGATTCTGCAATATATTTTTCCAACTCTAACTATGTAAAAGAAAGGATATTAAGATGGCTAACAGATGAAGAAGCAGTGAAAGGAGACTACAAAACAAGAATTCAGTTTTTGATAGTTGAAATGTCACCCGTTACTGACATAGATACCAGTGGCATCCAAGCCTTTGAAGAGTTACATAAAAGTCTTGAGAAAAGAGGTGTTCAGCTTGTTCTGGCAAACCCTGGTTCAACAGTGACAGACAAACTTTACACATCAAATTTTGCTAACATAATTGGAGAGGACAAGATTTTCCTCACTGTTGCAGAAGCTGTTGCATATTGCTCTCCAAAGCTAGATGTGAATCCATGA 1971 0.3902 MDSPTDKDMEKTKMDERNLSPSYDEPPYAYKVAIPPKQNLFKEFQYTVKETLFADDPLRSFKDQTKSRKLLLGIEFIFPILNWGRSYNLKKFRGDIISGLTIASLCIPQDIGYSKLAHLAPQYGLYSSFVPPLIYAFMGSSRDIAIGPVAVVSLLLGTLLSNEIDPVTHAAEYQRLAFTATFFAGITQATLGVFRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIKTKNFTTKTDIVNVLRAVFSSAEHGWNWQTILIGASFLSFLLVAKFIGKKNKKLFWVPAIAPLISVVLSTFFVFITRADKQGVEIVNHIEKGINPSSVHKIYFTGDYLGKGFKIGVTAGMIALTEAIAIGRTFASMKDYQLDGNREMVALGTMNVVGSMTSCYVATGSFSRSAVNYMAGCQTAVSNIVMSVVVFLTLQFITPLFKYTPNAILASIIISAVISLVDYQAAILIWKIDKFDFVACMGAFFGVVFISVEIGLLIAVSISFAKILLQVTRPRTAILGKIPRTTVYRNIQQYPEASKVPGVMIVRVDSAIYFSNSNYVKERILRWLTDEEAVKGDYKTRIQFLIVEMSPVTDIDTSGIQAFEELHKSLEKRGVQLVLANPGSTVTDKLYTSNFANIIGEDKIFLTVAEAVAYCSPKLDVNP 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02314 656 CDD STAS_SulP_like_sulfate_transporter 527 641 - -
Trre6g02314 656 MobiDBLite consensus disorder prediction 1 20 - -
Trre6g02314 656 ProSiteProfiles STAS domain profile. 526 648 IPR002645 -
Trre6g02314 656 Gene3D STAS domain 506 651 IPR036513 -
Trre6g02314 656 NCBIfam sulfate permease 79 644 IPR001902 GO:0016020|GO:0055085
Trre6g02314 656 SUPERFAMILY SpoIIaa-like 528 649 IPR036513 -
Trre6g02314 656 ProSitePatterns SLC26A transporters signature. 121 142 IPR018045 GO:0008271|GO:0008272
Trre6g02314 656 Pfam STAS domain 527 644 IPR002645 -
Trre6g02314 656 PANTHER SULFATE TRANSPORTER 39 649 IPR001902 GO:0016020|GO:0055085
Trre6g02314 656 FunFam Sulfate transporter 31 506 651 - -
Trre6g02314 656 Pfam Sulfate permease family 92 474 IPR011547 GO:0016020
Trre6g02314 656 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02314 Trre-Chr6 19941886 19945775 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02314 4 652 Inorganic Solute Cotransporters AT1G22150 76.000 0.0 982
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02314 K17470 - gmx:100804208 1109.36