Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02312 ATGCACGCGCCCCACGCTAATGCTCCTGCGTCGTGCGCAGCTTCCAGAAGCCAAAACCATGGCAAATTGGTCCGTGTGCGGCAGAATTCCAACAACACAAGCCTTTTGGTCATTCGTATAAGCTCTGACTCACTCTGCTTTGCAAATGCTAATGTTGTTAGAGAAAGAATACTCAAGTGGGTCACTGAAGAAAATGGACTTAAAGAAACTACTATAGGAAATGTCCAAGCAATAATATTGGACATGACTAATTTGATGAATGTTGATACTTCTGGAATTATATTTGCTATGGTGAACCAAATGTTGCTAGTAATTCACAAGCTTAAAGTGGCTAAGTGTTTGCAAAAAATCAGTGGTGATAAGGGGGGCAAATAG 375 0.4133 MHAPHANAPASCAASRSQNHGKLVRVRQNSNNTSLLVIRISSDSLCFANANVVRERILKWVTEENGLKETTIGNVQAIILDMTNLMNVDTSGIIFAMVNQMLLVIHKLKVAKCLQKISGDKGGK 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02312 124 MobiDBLite consensus disorder prediction 1 21 - -
Trre6g02312 124 Gene3D STAS domain 23 120 IPR036513 -
Trre6g02312 124 SUPERFAMILY SpoIIaa-like 35 93 IPR036513 -
Trre6g02312 124 ProSiteProfiles STAS domain profile. 45 93 IPR002645 -
Trre6g02312 124 Pfam STAS domain 34 93 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02312 Trre-Chr6 19895106 19898945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02312 35 119 Inorganic Solute Cotransporters AT5G10180 37.864 2.53e-12 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02312 K17469 - gmx:100776591 107.457