Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02274 ATGGATTCTAAGAAGCTTCGAAGAAAACCGAAACTCGAGCGTCGTAATGCTCTCAAGTACTTCGATTACGACGCTGGATCGTCTTCTTCTTCTTCTTCGTTTGATGATTCTTCTGGTTCACTATATACTCGTTCCATGGAGTTGTATGATCGTACTAGCTTCCGTATTGAAGGAATTGAAGGTGAGTTAGATCGAATTTGTCAGAGTTTAGGACTTTCTGGACCTGAAGATTTTGCAATTCCTGCTGCTGCTTGGGAAGCTATGAAGTTTCGATCGTCTTCGGATATTCTTCCCAGTTTGAAGATTCAGGATATTGATCTTCAGCAGCAGAAGGTGGAAGAAGTTGAATTGAGTGAGAAATGTGAAGATATGGATAGGGATAGGGATAGTGTTAGGGTTACAGATGAGGTTGCTGAGACTGCTGTTGTTGGTAGTGGTGGTGGTGGTATCAATGGAATTCGTCCACCGATGATTAAGCCGCCACCGGGGATGAGAGTTCGGGTTGTTGATAACACGTGTTCAACTTGGGACCTTTTGAAGGAATTGGCTCCTGTAGTGGAAGGGGAAGAAGGGGTTTTCAACAGGGAAATGGAGGAGAAAGAAAGTGAGGAAGTTGATAAGGTAAGTCCCAAGAGAGAGGAGGAAAATGTGGTGGTGGATAATGCGGCAATGATTGCTGAGATTGTTGATGGTCTTTTGGATTTTAGTACTTCAAATGAAGATGATTCTTCTAGCTCTGCCACGGAACCTAGGTCTAATAATGTATCTCCTAACGGGAGAATTAAGCGTGTTATTACCCCTGGATGCTGGCAAAAAGGCGAGTTTTTGGGGGGTGGTTCGTTTGGTTCTGTTTATGAAGGAATTTCTGACGATGGAATCTTTTTTGCTGTAAAAGAAGTTTCACTGCTTGATCAAGGGGATCAGGGAAAACAAAGTGTCTATCAACTGGAGCAGGAAATTGCACTTTTGAGTCGTTTTGAACATGACAATATAGTTCAATACTATGGCACTGAAATGGATGAATCCAAGCTGTATATCTTTATTGAGCTTGTGACCAAAGGTTCTCTTCGAAACCTCTATCAGAGGTATACTCTCCGAGATTCCCAAGTATCTGCTTATACGAGACAAATTCTGCATGGTTTGAAGTATCTTCACGATCAAAATGTAGTTCACAGGGACATCAAATGTGCAAATATATTGGTGCACGCAAGTGGATCTGTCAAACTTGCAGATTTTGGTTTAGCAAAGGCAACCAAATTGAATGACGTTAAATCATGCAAGGGGACAGCATTCTGGATGGCGCCTGAGGTTGTGAAAGGAAAAAACAAAGGTTACGGGCTTCCAGCTGATGTTTGGAGTCTGGGATGCACTGTGCTGGAGATGCTAACGGGCGAAATTCCATACTCCAATTTAGAATGTATGCAGGCAATATTTAGAATTGGAAAAGGCGAGCCACCTCCTATTCCTGACACTCTTTCACGAGATGCAAAGGATTTTATTTTGCAGTGCCTTCAAGTTAATCCTGATGATCGTCCTACTGCTGCTCAACTCTTAAACCATCCATTTCTCCAAAGGCTACTTTCCCAGTCTTCATCTCCTTACATTCATGGCAGAAGGGGCTAA 1623 0.4264 MDSKKLRRKPKLERRNALKYFDYDAGSSSSSSSFDDSSGSLYTRSMELYDRTSFRIEGIEGELDRICQSLGLSGPEDFAIPAAAWEAMKFRSSSDILPSLKIQDIDLQQQKVEEVELSEKCEDMDRDRDSVRVTDEVAETAVVGSGGGGINGIRPPMIKPPPGMRVRVVDNTCSTWDLLKELAPVVEGEEGVFNREMEEKESEEVDKVSPKREEENVVVDNAAMIAEIVDGLLDFSTSNEDDSSSSATEPRSNNVSPNGRIKRVITPGCWQKGEFLGGGSFGSVYEGISDDGIFFAVKEVSLLDQGDQGKQSVYQLEQEIALLSRFEHDNIVQYYGTEMDESKLYIFIELVTKGSLRNLYQRYTLRDSQVSAYTRQILHGLKYLHDQNVVHRDIKCANILVHASGSVKLADFGLAKATKLNDVKSCKGTAFWMAPEVVKGKNKGYGLPADVWSLGCTVLEMLTGEIPYSNLECMQAIFRIGKGEPPPIPDTLSRDAKDFILQCLQVNPDDRPTAAQLLNHPFLQRLLSQSSSPYIHGRRG 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02274 540 SUPERFAMILY Protein kinase-like (PK-like) 254 530 IPR011009 -
Trre6g02274 540 Pfam Protein kinase domain 271 523 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g02274 540 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 134 532 - -
Trre6g02274 540 ProSitePatterns Protein kinases ATP-binding region signature. 276 298 IPR017441 GO:0005524
Trre6g02274 540 Gene3D Transferase(Phosphotransferase) domain 1 269 536 - -
Trre6g02274 540 FunFam Mitogen-activated protein kinase 1, putative, expressed 268 535 - -
Trre6g02274 540 SMART serkin_6 270 523 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g02274 540 ProSiteProfiles Protein kinase domain profile. 270 523 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g02274 540 MobiDBLite consensus disorder prediction 236 258 - -
Trre6g02274 540 Coils Coil 107 127 - -
Trre6g02274 540 ProSitePatterns Serine/Threonine protein kinases active-site signature. 389 401 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02274 Trre-Chr6 19579761 19587254 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02274 11 527 MAP Kinase Kinase Kinase AT4G08500 51.038 4.79e-164 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Trre6g02274 Pkinase 2.1e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02274 K13414 - gmx:100819999 769.229