Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02242 ATGCCTACCATAACCAATCATATAATAACCCAAAAAGAAAACCAAAGGCCACAGAAAACTGAGAAACAACCATCATGGTCAGTGGTAAGAGGCTTTTTAGCTTGTAGAAATGTTGAAATCCAACAACAACAGCATAAGGAAGCAAAGCAACAGCCACAACCTCAACCTGTACCAGAAGCAAAACAACCAAAGAAAAAACAGGAACAGAGGAAGCTGAAAGAAGAAAGAGTCTCAGAAGATAACAACAAAAAAAGCAAGAAGATGAAATGTTCAGGTTCTCTCTGCAACAACACTGGAATGATGGCAAAGCCAGAAACAACAATAACAGCAGCAGCAGCTGCAACAAGAACAACTACTGATATTCACAAGAAAAAGGTGTCACTTGGTGGATGCAAAAACAACTTGGCTTCTAGTTCTAGTAGATCCATGAAAGCTCCTCTGAATGAACTCAATGGAAGAACTGTGTCAGCCTTGTCTTCTTCTTCGCTTTCAGCAGCATCTTCTAACTCTTCCGGTGCTGGTTCTTTTAAGGGAATGCCATTTAGGAGACTCTCCGGTTGTTACGAGTGTCGAATGGTGGTTGACCCTGTTCTTGGTTTCACCAGAGACTCTTCTCTAAGAAGCTCTATTTGTTCTTGTCCTGATTGTGGTGAGATCATGAAATCTGAAAATCTTGAACATCATCAAGCTGTCAAACATGCAGTTTCTGAGCTGGGTCCAGAAGATACAAGCAAGAACATAGTTGAAATAATATTCCATTCAAGCTGGTTAAAGAAGCAATCTCCGGTCTGCAAAATCGACCGCATCCTTAAAGTCCACAACACCCAGAAAACCATCTCCAAATTCGAAGAGTACAGAGACTCAATCAAAGCAAAAGCGACAAATCTATCAAAAAAACACCCCCGCTGCATAGCAGACGGAAACGAGCTACTAAGGTTTCATTGCACCACTTTTGTTTGTTCTTTAGGACTAAACGGTTCCTCAAACCTCTGCAACACAACCTCACAATGCAATGTGTGTAGCATAATAAAACACGGGTTCAAATTGAGTGACGGAAATGGGATACAAACGACCGCAACGAGTGGGAAAGCACACGACAAAGCTAGTAGTGTTTTGGAGGTTTCAGGTTGTGAGAGTGATGAGAGGAGGGCAATGTTGGTTTGTAGGGTGATAGCAGGAAGAGTGAAGAACATGGAAGGTAGTAGTAATGGTGTGGAGGAGTGTGATTCGGTTAGTGCTGGTGATGTTGGGGCTTATTCTAATTTGGATGAGTTATATGTGTACAATCCACGAGCCATATTGCCTTGCTTTGTTGTAATCTATAGAGGCTTTTGA 1335 0.418 MPTITNHIITQKENQRPQKTEKQPSWSVVRGFLACRNVEIQQQQHKEAKQQPQPQPVPEAKQPKKKQEQRKLKEERVSEDNNKKSKKMKCSGSLCNNTGMMAKPETTITAAAAATRTTTDIHKKKVSLGGCKNNLASSSSRSMKAPLNELNGRTVSALSSSSLSAASSNSSGAGSFKGMPFRRLSGCYECRMVVDPVLGFTRDSSLRSSICSCPDCGEIMKSENLEHHQAVKHAVSELGPEDTSKNIVEIIFHSSWLKKQSPVCKIDRILKVHNTQKTISKFEEYRDSIKAKATNLSKKHPRCIADGNELLRFHCTTFVCSLGLNGSSNLCNTTSQCNVCSIIKHGFKLSDGNGIQTTATSGKAHDKASSVLEVSGCESDERRAMLVCRVIAGRVKNMEGSSNGVEECDSVSAGDVGAYSNLDELYVYNPRAILPCFVVIYRGF 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02242 444 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 88 441 - -
Trre6g02242 444 MobiDBLite consensus disorder prediction 61 87 - -
Trre6g02242 444 MobiDBLite consensus disorder prediction 1 26 - -
Trre6g02242 444 SUPERFAMILY ADP-ribosylation 235 443 - -
Trre6g02242 444 MobiDBLite consensus disorder prediction 40 99 - -
Trre6g02242 444 Gene3D - 233 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02242 Trre-Chr6 19288079 19289873 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02242 176 442 C2H2 Transcription Factor Family AT1G75710 52.685 1.14e-97 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02242 - - psat:127084116 699.123