Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02241 ATGAGCAAATCCAAAACTCAAAGAATGCCTACCATAACCAATCATATAATAACCCAAAAAGAAAACCAAAGGCCACAGAAAACTGAGAAACAACCATCATGGTCAGTGGTAAGAGGCTTTTTAGCTTGTAGAAATGTTGAAATCCAACAACAACAGCATAAGGAAGCAAAGCAACAGCCACAACCTCAACCTGTACCAGAAGCAAAACAACCAAAGAAAAAACAGGAACAGAGGAAGCTGAAAGAAGAAAGAGTCTCAGAAGATAACAACAAAAAAAGCAAGAAGATGAAATGTTCAGGTTCTCTCTGCAACAACACTGGAATGATGGCAAAGCCAGAAACAACAATAACAGCAGCAGCAGCTGCAACAAGAACAACTACTGATATTCACAAGAAAAAGGTGTCACTTGGTGGATGCAAAAACAACTTGGCTTCTAGTTCTAGTAGATCCATGAAAGCTCCTCTGAATGAACTCAATGGAAGAACTGTGTCAGCCTTGTCTTCTTCTTCGCTTTCAGCAGCATCTTCTAACTCTTCCGGTGCTGGTTCTTTTAAGGGAATGCCATTTAGGAGACTCTCCGGTTGTTACGAGTGTCGAATGGTGGTTGACCCTGTTCTTGGTTTCACCAGAGACTCTTCTCTAAGAAGCTCTATTTGTTCTTGTCCTGATTGTGGTGAGATCATGAAATCTGAAAATCTTGAACATCATCAAGCTGTCAAACATGCAGTTTCTGAGCTGGGTCCAGAAGATACAAGCAAGAACATAGTTGAAATAATATTCCATTCAAGCTGGTTAAAGAAGCAATCTCCGGTCTGCAAAATCGACCGCATCCTTAAAGTCCACAACACCCAGAAAACCATCTCCAAATTCGAAGAGTACAGAGACTCAATCAAAGCAAAAGCGACAAATCTATCAAAAAAACACCCCCGCTGCATAGCAGACGGAAACGAGCTACTAAGGTTTCATTGCACCACTTTTGTTTGTTCTTTAGGACTAAACGGTTCCTCAAACCTCTGCAACACAACCTCACAATGCAATGTGTGTAGCATAATAAAACACGGGTTCAAATTGAGTGACGGAAATGGGATACAAACGACCGCAACGAGTGGGAAAGCACACGACAAAGCTAGTAGTGTTTTGGAGGTTTCAGGTTGTGAGAGTGATGAGAGGAGGGCAATGTTGGTTTGTAGGGTGATAGCAGGAAGAGTGAAGAACATGGAAGGTAGTAGTAATGGTGTGGAGGAGTGTGATTCGGTTAGTGCTGGTGATGTTGGGGCTTATTCTAATTTGGATGAGTTATATGTGTACAATCCACGAGCCATATTGCCTTGCTTTGTTGTAATCTATAGAGGCTTTTGA 1359 0.4165 MSKSKTQRMPTITNHIITQKENQRPQKTEKQPSWSVVRGFLACRNVEIQQQQHKEAKQQPQPQPVPEAKQPKKKQEQRKLKEERVSEDNNKKSKKMKCSGSLCNNTGMMAKPETTITAAAAATRTTTDIHKKKVSLGGCKNNLASSSSRSMKAPLNELNGRTVSALSSSSLSAASSNSSGAGSFKGMPFRRLSGCYECRMVVDPVLGFTRDSSLRSSICSCPDCGEIMKSENLEHHQAVKHAVSELGPEDTSKNIVEIIFHSSWLKKQSPVCKIDRILKVHNTQKTISKFEEYRDSIKAKATNLSKKHPRCIADGNELLRFHCTTFVCSLGLNGSSNLCNTTSQCNVCSIIKHGFKLSDGNGIQTTATSGKAHDKASSVLEVSGCESDERRAMLVCRVIAGRVKNMEGSSNGVEECDSVSAGDVGAYSNLDELYVYNPRAILPCFVVIYRGF 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02241 452 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 96 449 - -
Trre6g02241 452 MobiDBLite consensus disorder prediction 1 21 - -
Trre6g02241 452 MobiDBLite consensus disorder prediction 48 103 - -
Trre6g02241 452 MobiDBLite consensus disorder prediction 69 95 - -
Trre6g02241 452 SUPERFAMILY ADP-ribosylation 243 451 - -
Trre6g02241 452 Gene3D - 243 450 - -
Trre6g02241 452 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02241 Trre-Chr6 19288079 19289897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02241 184 450 C2H2 Transcription Factor Family AT1G75710 52.685 8.33e-98 300