Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02233 ATGAAATATTTCATAAATTTCTCCTTCATTTTTCTTTTGTTTATTACTACTTCCGTCTCCGGTAAAATATATTCAGATCATATCTCACCGGATTTCACTGCTTCATATCTTACCGGTGATGGTAGCACCGGCACATTCTTGTTGTCGCGAAATCAAACATTCAAAGCAGCTATATTCAGTCCTGACAATCAACAAACAAATTTCTATCTATGCATCATTCATGCCGCGTCTAACACTATTATTTGGTCTGCTAACCGCGACGCTCCAATCTCCAATTCCGATAAAATGAAACTAACCGGTGAAGGGATAACTATTTTCGACGAAAATGGAAATTCTAAATGGTCAACACCGAAACTTAAATCACAAGTAAAAAAACTTTCACTCACTGATATGGGAAACCTTGTTTTACTTGATCAATTCAATAATTCTCTTTGGGAGAGTTTTCAAAATCCAACCGATACAATTGTTATCGGACAACTTTTATCGGTTGGATCATCATTGTCAAGTGCTTCATCAAGTTCAAATTTCTCAACTGGAAATTACAAGCTTACGATCACATCTTCTGATGCAATTCTTCAATGGTTTGGACAAACATATTGGAAACTTTCAGTGGATTCAAAAGCTTACAGAATTTCACATGAAGATGTTCAATACATGAAAGTAAACACAACAGGTTTTTACATCTTTGGACACAATGAAACAGTACTTGTTTATCAAGTTAGTTTATCAGTAACTAATTTTCGTATCGCGAAATTGGCTTACAATGGTCAATTCACTATTAGTAGTCTTTCAGGAGAAAATTTGAAGCAAGAATTTGTTGGACCTGATGATGGTTGTCAAATTCCATTAGCATGTGGAAGATTAGGTTTATGTAATGATAAATCTTCACCTGGTTGTTCTTGTCCTTCAAATTTCCATGTTGCATCGGGTAATTCCGGTGGTTGTGTTCCGAACAATGGATCTCGTTCTTTGTCCTTAGCTTGTAGTAATTCTTCTACAAATAATCATAGTCAATCTTCTGTTTCTTTTTTGAGTATAGGATATGGTGTGAGAAATTCTTCTGGTTCTTGCTACATGATTGAGAATGAATTAGGATCAATTAGTAATGGAGGTGAAGGTGACATGTTAGGGTTGATTAAAACTAATGTTAGGTTTGATGTTGATGATGAAGAAAATTCTCAAAAAGATGGATTTCCTGTTATTGCTGCAGTTTTGTTACCAATTGGTGGAATGATTCTTTTAATGGTTCTTGTGTTTTTTGTTATGTGGAGAAAGTTCCGAAAGTCGAAGAAGAAAGAGGTAAAATTAGGGAAACAAATCTCGATTTCACGTTCATCGTGCGAGTTGGATTCGGATCCCTCCTTTGCCATTCCTGGTTTACCGATGAGGTTCGACTATGAAGAGCTTGAGACAGCTACTGAAAATTTCAAGACTCTGATAGGATCTGGTGCATTCGGCGTAGTGTACAAAGGTGTCCTACCTGATAAGACTATTGTGGCTGTAAAGAAAATAATCAACATTGGAATCCAAGGGAAGAAAGATTTCTTAGCCGAGATAGCTGTTATTGGAAACATTCATCATGTTAATTTAGTTAGACTCAAAGGCTTTTGTGCTCAAAGGGGACACCGAATGTTGGTTTACGAGTACATGAACCGTGGTTCACTCGATCGCAACCTCTTCGGCGGTGTTGGACAACCAGTTTTGGAATGGCAAGAGAGGGTAGATGTTGCACTTGGAACAGCGCGCGGACTTGCTTATCTTCATAGTGGATGTGAGCAAAAGATAATTCACTGTGATATCAAACCAGAGAATATTCTTTTGCATGATCATTTTCAAGCTAAATTATCTGATTTCGGACTTTCGAAACTTCTTAGTCCTGAACAATCTGGTTTGTTCACAACAATGAGAGGAACTCGCGGTTATCTTGCTCCTGAATGGCTCACAAACTCAGCAATTTCGGAGAAAACCGATGTATATAGTTTTGGAATGGTGCTTCTTGAATTGATTAGTGGTAGAAAAAACTGTTCTTTCAGATCAAGAAGTCATAGCATGGATGATGATCATAACAACAGCAGTGGAAATAATCGAAATTCGTCAAATTCATCAACAGCTGGACTTATTTATTTTCCACTATATGCATTAGAGATGCATGAACAAAAGAGTTACATGGATTTGGCTGATCCAAGGCTAGAAGGACGAGTTACAATCGATGAAGTCGAGAAACTTGTTCGAATTGCATTATGTTGTGTTCATGAAGATCCATCACTTAGGCCAAACATGGTTACTGTTGTTGGAATGTTGGAAGGTGGAACTCCATTACCACAACCTAGGATGGATTCTTTGAATTTTTTAAGGTTTTACGGTCGTAGGTTTTCCGAGGCTTCTGTTATAGCAGAAGAAAATGAACATGGTTCTGTCATGATGCAACAACCGCGTGATTCAACACAGTTCGTTAGTGGGTTTTCTTACATATCTTCACAACAAATTTCAGGGCCAAGATAG 2502 0.3741 MKYFINFSFIFLLFITTSVSGKIYSDHISPDFTASYLTGDGSTGTFLLSRNQTFKAAIFSPDNQQTNFYLCIIHAASNTIIWSANRDAPISNSDKMKLTGEGITIFDENGNSKWSTPKLKSQVKKLSLTDMGNLVLLDQFNNSLWESFQNPTDTIVIGQLLSVGSSLSSASSSSNFSTGNYKLTITSSDAILQWFGQTYWKLSVDSKAYRISHEDVQYMKVNTTGFYIFGHNETVLVYQVSLSVTNFRIAKLAYNGQFTISSLSGENLKQEFVGPDDGCQIPLACGRLGLCNDKSSPGCSCPSNFHVASGNSGGCVPNNGSRSLSLACSNSSTNNHSQSSVSFLSIGYGVRNSSGSCYMIENELGSISNGGEGDMLGLIKTNVRFDVDDEENSQKDGFPVIAAVLLPIGGMILLMVLVFFVMWRKFRKSKKKEVKLGKQISISRSSCELDSDPSFAIPGLPMRFDYEELETATENFKTLIGSGAFGVVYKGVLPDKTIVAVKKIINIGIQGKKDFLAEIAVIGNIHHVNLVRLKGFCAQRGHRMLVYEYMNRGSLDRNLFGGVGQPVLEWQERVDVALGTARGLAYLHSGCEQKIIHCDIKPENILLHDHFQAKLSDFGLSKLLSPEQSGLFTTMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELISGRKNCSFRSRSHSMDDDHNNSSGNNRNSSNSSTAGLIYFPLYALEMHEQKSYMDLADPRLEGRVTIDEVEKLVRIALCCVHEDPSLRPNMVTVVGMLEGGTPLPQPRMDSLNFLRFYGRRFSEASVIAEENEHGSVMMQQPRDSTQFVSGFSYISSQQISGPR 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02233 833 Pfam D-mannose binding lectin 79 162 IPR001480 -
Trre6g02233 833 MobiDBLite consensus disorder prediction 679 699 - -
Trre6g02233 833 ProSitePatterns Serine/Threonine protein kinases active-site signature. 595 607 IPR008271 GO:0004672|GO:0006468
Trre6g02233 833 PIRSF SRK 1 348 IPR024171 GO:0004674
Trre6g02233 833 PIRSF SRK 327 820 IPR024171 GO:0004674
Trre6g02233 833 Gene3D Phosphorylase Kinase; domain 1 442 549 - -
Trre6g02233 833 Gene3D Transferase(Phosphotransferase) domain 1 550 773 - -
Trre6g02233 833 SUPERFAMILY alpha-D-mannose-specific plant lectins 70 202 IPR036426 -
Trre6g02233 833 Pfam S-locus glycoprotein domain 219 306 IPR000858 GO:0048544
Trre6g02233 833 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 44 776 - -
Trre6g02233 833 SMART blect_4 38 151 IPR001480 -
Trre6g02233 833 CDD B_lectin 42 151 IPR001480 -
Trre6g02233 833 CDD STKc_IRAK 480 769 - -
Trre6g02233 833 Gene3D - 42 157 - -
Trre6g02233 833 FunFam Serine/threonine-protein kinase 550 775 - -
Trre6g02233 833 ProSitePatterns Protein kinases ATP-binding region signature. 480 503 IPR017441 GO:0005524
Trre6g02233 833 ProSiteProfiles Protein kinase domain profile. 474 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g02233 833 SUPERFAMILY Protein kinase-like (PK-like) 454 767 IPR011009 -
Trre6g02233 833 Pfam Protein kinase domain 477 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g02233 833 SMART serkin_6 474 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g02233 833 ProSiteProfiles Bulb-type lectin domain profile. 32 149 IPR001480 -
Trre6g02233 833 FunFam serine/threonine-protein kinase PBS1-like 444 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02233 Trre-Chr6 19224142 19226748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02233 412 776 Receptor kinase-like Gene Family AT5G20050 39.370 1.45e-74 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Trre6g02233 Pkinase 1.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02233 - - psat:127084110 1313.9