Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02203 ATGACCAATGCCAAAAGTGGTCGAATTGTTAGATTAAAACTTCTATTTACCAATGCTAAACCATACCTTTTAATGATTGGCCTTCAATTTGGTATGGCTGGTAATTACATCTTTGGCAAGGATTTTCTTAACCGTGGAATGAGCCGTTTCATGTTCATTGTATATCGCAATGCCATGGCCGCAGTCGCCGTTGCCCCCTTTGCACTCATTTTTGAAAGGAGAAAAAGGCCTAAGATGACACTCTCTATCTTCCTACAGATAATGGTGCTGGGATTTCTAGAGCCAGTTTTTAACCAAAGCTTCACTTACTTGGGGATGAAGTATACTTCTGCTTCATTCACTTCTGCTATTATGAATGCAGTGCCTTCTATAACCTTTCTGCTTGCTGTCATTGTCAGGTTGGAGCATCTTAAATGCAAGGATATTAGAAGTCAAGCCAAAGTGTTTGGAACATTAGTAACCTTTGGCGGCGCTTTGGTAATGGCAATTTACAAAGGACCTGGATTCAACATTTTCCATTCTGGAAGCACCACTCAAAATCAAAATGGAACCCAAGGATCCTCTCATAACCACCAAACTTCTGGAGCTCTTTATATACTAATGGGTTGTGTTGCTTTATCTTCTTTCTACATTTTGCAGTCCGTAACGTTAAAAAGATACCCGGCGGAGCTATCATTGGCAACCTTGATATGCCTGACGGGAGGAGCACAGGCAACTGCAGTGGCCCTTGTGGCCGAGCGTCACTCACACGCTTGGACCATTGGTTGGGATTACAGGCTCTATGCTCCTCTTTACACGGGAATAGTTAGTTCAGGAATTGCATACTATGTTCAAGGGCTAGTGATGCAAATGAGAGGGCCTGTATTTGCAACAGCCTTTAATCCTCTTTGCATGATTATAGTTGCTGGTTTAGGCTCCTTTATATTAGGTGAAAATCTCTATCTTGGAAGTATCATTGGAGCTGTTATCATAGCACTAGGCCTTTACACAGTTGTATGGGGAAAGGCCAAAGACTATTCAGAATCAGACTCCAAATTACCATCATCAGAAGATACAAAGTCACTTCCAAGTACTTCAATGGATGATCCCAAAATTGATATTATTTCTGTTAATATGGAAAATCACCCACCAACAAATAATAGATTAGAAGGACTGAACAAATTGGAGAAAGAATCAGAGTTGTATGTTACAACAGAAGTTTACTAG 1206 0.4071 MTNAKSGRIVRLKLLFTNAKPYLLMIGLQFGMAGNYIFGKDFLNRGMSRFMFIVYRNAMAAVAVAPFALIFERRKRPKMTLSIFLQIMVLGFLEPVFNQSFTYLGMKYTSASFTSAIMNAVPSITFLLAVIVRLEHLKCKDIRSQAKVFGTLVTFGGALVMAIYKGPGFNIFHSGSTTQNQNGTQGSSHNHQTSGALYILMGCVALSSFYILQSVTLKRYPAELSLATLICLTGGAQATAVALVAERHSHAWTIGWDYRLYAPLYTGIVSSGIAYYVQGLVMQMRGPVFATAFNPLCMIIVAGLGSFILGENLYLGSIIGAVIIALGLYTVVWGKAKDYSESDSKLPSSEDTKSLPSTSMDDPKIDIISVNMENHPPTNNRLEGLNKLEKESELYVTTEVY 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02203 401 PANTHER WAT1-RELATED PROTEIN 20 343 IPR030184 GO:0016020|GO:0022857
Trre6g02203 401 Pfam EamA-like transporter family 20 161 IPR000620 GO:0016020
Trre6g02203 401 Pfam EamA-like transporter family 194 332 IPR000620 GO:0016020
Trre6g02203 401 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 336 - -
Trre6g02203 401 MobiDBLite consensus disorder prediction 340 361 - -
Trre6g02203 401 SUPERFAMILY Multidrug resistance efflux transporter EmrE 55 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02203 Trre-Chr6 18670404 18673803 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02203 10 375 Nodulin-like Gene Family AT2G37460 45.405 2.85e-116 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02203 - - gmx:100786326 579.326