Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02199 ATGGAGGACCAAAATGTTAATAGTAAATTGAGCAATGGAGTATTATTTCGTAAGTTGAAACCATATCTTGCTATTTTATCCCTTCAATTTGGTTACTCGGGGATGTACATCATTACTATGGTTTCTTTTAAACATGGTATGAGTCATTGGATTCTCTCCGTATACCGTCATGTTGTTGCCGCAATCATAATAACCCCTTTCGCTCTTGTTCTCGAAAGAAAAATAAGGCCAAAGATGACTCTCCCCATCTTCTTGAGGATAGTGGCACTTGGTTTCCTCGAGCCAGTGCTAGATCAAAATTTGTACAACATGGGAATGAAGATGACTTCAACAACGTTTGCATCTGCCACTGTTAATGTTCTTCCAGCTATTACTTTTATAATGGCACTCACTTTCAGGTTGGAGTCGGTGAATTGGAAAAAAATTCACAGCGTAGCCAAAGTAATTGGAACGGTTATAACCGTTTCAGGGGCTATGGTTATGACTTTATACAAAGGCCCTGCCTTTCAGATCATAAAGGGAGGAGGAGCCATCGACCACCACGGAGGTGCCGCCAATGACGAACCATCTGACCAAAATTGGGTGATGGGCACAGTAATGCTCATATCAAGTTGTTGTAGTTGGGCTGGATTCTTTATTTTGCAATCATTCACTTTGAAGAAGTACCCAGCAGAGCTATCACTCACAGCTTGGATTTGCTTGATGGGTATTATTGAGGGTTCAATTGCATCACTTATATTTGAAAGGGACATGAGTGTGTGGATCATAGGTTGGGACTCAAGGCTTCTTGCTTGTGTTTATTCTGGTGTGATATGCTCTGGAATGGCATATTATGTACAAGGAGTTGTAACTAGGGAACGTGGTCCAGTTTTTGTGACTTCTTTTAGTCCACTATGTATGATTATCACTGCTGCATTGGGTTCTCTTGTCTTAGCTGAACAAGTTCATCTTGGAAGTATATTAGGAGCTATTGTGATTGTAACTGGACTTTACACTGTGGTGTGGGGAAAAAGCAAAGATCGTCGTGAAAGCACAATAGAAATAGGGAAATGTGAAGGACAAGATCAATTGCCAATAAAGAATGGAACAAAATCAGAATCAAACATTTTGGATGGAATTGAGATTAATGTTCAAGCTGAAAAATTGAAAAAAGGTGCAGCAAAAAATGTTCCAACACAAGGATGA 1185 0.3983 MEDQNVNSKLSNGVLFRKLKPYLAILSLQFGYSGMYIITMVSFKHGMSHWILSVYRHVVAAIIITPFALVLERKIRPKMTLPIFLRIVALGFLEPVLDQNLYNMGMKMTSTTFASATVNVLPAITFIMALTFRLESVNWKKIHSVAKVIGTVITVSGAMVMTLYKGPAFQIIKGGGAIDHHGGAANDEPSDQNWVMGTVMLISSCCSWAGFFILQSFTLKKYPAELSLTAWICLMGIIEGSIASLIFERDMSVWIIGWDSRLLACVYSGVICSGMAYYVQGVVTRERGPVFVTSFSPLCMIITAALGSLVLAEQVHLGSILGAIVIVTGLYTVVWGKSKDRRESTIEIGKCEGQDQLPIKNGTKSESNILDGIEINVQAEKLKKGAAKNVPTQG 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02199 394 PANTHER WAT1-RELATED PROTEIN 21 341 IPR030184 GO:0016020|GO:0022857
Trre6g02199 394 Pfam EamA-like transporter family 196 334 IPR000620 GO:0016020
Trre6g02199 394 Pfam EamA-like transporter family 30 154 IPR000620 GO:0016020
Trre6g02199 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 55 155 - -
Trre6g02199 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02199 Trre-Chr6 18617018 18621404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02199 18 378 Nodulin-like Gene Family AT4G08300 65.854 1.01e-172 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02199 - - gmx:100783910 647.891