Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02172 ATGTCACCGTCCGCCGGATCCCACGTCCCCCTATTAACCGGAACAACAAATTCGGCGGCTGAGCCTGGTTCAGTTCCCGGCGCTGTATTCAATGTTGCAACTACAATAATTGGCGCCGGAATCATGTCAATCCCGGCGATTCTAAAAGTTCTTGGAGTATTTCCCTCTTTCGCCTTAATTCTGATCGTCGCCGTGTTAGCCGAAGTTTCCGTCGAATTTCTCTTGCGTTTTACACATGCCGGTGAAACTACGACTTACTCCGGTGTCATGAGGGAAGCTTTTGGGTCCTATGGAGCAATATCCGTTCAAGTTTGTGTCATAGTTACAAACTTTGGGGCTTTAATTCTATATCTTATTATCATCGGGGATGTTCTATCTGGAAAGGAAAGTGGAGATGAAGTGCACTTGGGAATTTTGCAGCAATGGTTTGGGATTCACTGGTGGAATTCAAGGGAAGTTGCTCTTCTCATCACCTTGGTTCTTGTTATGCTTCCATTGGTCTTGTACAGACGTGTAGAATCCTTGAAGTACAGTTCGGCAATATCAACTCTTCTTGCTGTGGCATTTGTTGCCATTTGTTCTGGCTTGGCTATTGTTGCTTTGGTGCAAGGAAAAACACAAACTCCTAAATTAGTTCCTCGATTAGACTACCAAACATCATTCTTCGATTTGTTCACTGCAGTTCCCGTTGTAGTCACAGCATTCACATTTCATTTCAATGTGCATCCAATTGGATTTGAGCTTGCAAATCCATCCGATATGAAAACCGCAGTTCGATTAGCAATAATGTTTTGTGCATTTATATACTTCACAATTGGTTTATTTGGCTACCTCTTATTCGGAGATTCAACACAGTCAGACATTCTAATCAATTTTGATCAGAGTTCCGATTCTACTGTTGGTTCCTTGTGCAATAGTTTAATTCGAGTTAGCTATGCACTCCACATCATGCTAGTATTCCCTATTTTGAATTTCTCTTTAAGAGCCAACATTGATGAACTGCTATTCCCTAAGAAGCCTCTACTAGCCACAGACAACAAGAGATTTGTAATTATCACTCTTTTGCTCTTAGTATTCTCCTATCTAGCTGCTATAGCAATCCCAGATATTTGGTACTTCTTTCAGTTTCTAGGATCAACAACTGCACTATGCCTTGCCTTTATTTTCCCAGGAACTATTGCTTTAAGGGATGCTCTTGGCATATCAACAAGAAAAGACAAAATTATAGCACTGGTTATGATTATACTAGCTGTAGTGACAAGTGCAATTGCAATTTCTACCAACATATACAATGCTTTAAGTAGCAAGTCATAA 1314 0.4072 MSPSAGSHVPLLTGTTNSAAEPGSVPGAVFNVATTIIGAGIMSIPAILKVLGVFPSFALILIVAVLAEVSVEFLLRFTHAGETTTYSGVMREAFGSYGAISVQVCVIVTNFGALILYLIIIGDVLSGKESGDEVHLGILQQWFGIHWWNSREVALLITLVLVMLPLVLYRRVESLKYSSAISTLLAVAFVAICSGLAIVALVQGKTQTPKLVPRLDYQTSFFDLFTAVPVVVTAFTFHFNVHPIGFELANPSDMKTAVRLAIMFCAFIYFTIGLFGYLLFGDSTQSDILINFDQSSDSTVGSLCNSLIRVSYALHIMLVFPILNFSLRANIDELLFPKKPLLATDNKRFVIITLLLLVFSYLAAIAIPDIWYFFQFLGSTTALCLAFIFPGTIALRDALGISTRKDKIIALVMIILAVVTSAIAISTNIYNALSSKS 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02172 437 Pfam Transmembrane amino acid transporter protein 23 423 IPR013057 -
Trre6g02172 437 PANTHER AMINO ACID TRANSPORTER 16 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02172 Trre-Chr6 18364749 18367021 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02172 1 431 Amino Acid or Auxin Permease AAAP Family AT3G56200 58.469 3.37e-178 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02172 - - gmx:100815694 685.256