Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02171 ATGTCACCGTCCGCCGGAATCAACGTCCCTCTTTTACCTGGATCAAAATCAACGGCGGAGCATGGTACAATCCCCGGCGCCGTATTCAATGTCGCTACAAGCATAATTGGATCTGGAATAATGTCAATTCCAGCAATTCTAAAAGTTCTCGGTGTGTTTCCTTCATTCGCATTGATTCTGATCGTGGCGGTGCTTGCGGAAGTTTCCGTAGATTTTCTGATGCGTTTTACCGATGCCGGTGCAAAAACGACGTATGCCGGTGTCATGAAGGAGGCTTTTGGACCGGTAGGAGCATTGACCACTAAAGTTTTTGTTATAATTAACAACTTTGGGGGATTAATTCTCTTACTTATTATTACAGGGGATGTTCTATCTGGAAAGGAAAGTGGAGATGAAGTGCACTTGGGAATTTTGCAGCAATGGTTTGGGATTCACTGGTGGAATTCAAGGGAAGTTGCTCTTCTCATCACCTTGGTTCTTGTTATGCTTCCATTGGTCTTGTACAGACGTGTAGAATCCTTGAAGTACAGTTCGGCAATATCAACTCTTCTTGCTGTGGCATTTGTTGCCATTTGTTCTGGCTTGGCTATTGTTGCTTTGGTGCAAGGAAAAACACAAACTCCTAAATTAGTTCCTCGATTAGACTACCAAACATCATTCTTCGATTTGTTCACTGCAGTTCCCGTTGTAGTCACAGCATTCACATTTCATTTCAATGTGCATCCAATTGGATTTGAGCTTGCAAATCCATCCGATATGAAAACCGCAGTTCGATTAGCAATAATGTTTTGTGCATTTATATACTTCACAATTGGTTTATTTGGCTACCTCTTATTCGGAGATTCAACACAGTCAGACATTCTAATCAATTTTGATCAGAGTTCCGATTCTACTGTTGGTTCCTTGTGCAATAGTTTAATTCGAGTTAGCTATGCACTCCACATCATGCTAGTATTCCCTATTTTGAATTTCTCTTTAAGAGCCAACATTGATGAACTGCTATTCCCTAAGAAGCCTCTACTAGCCACAGACAACAAGAGATTTGTAATTATCACTCTTTTGCTCTTAGTATTCTCCTATCTAGCTGCTATAGCAATCCCAGATATTTGGTACTTCTTTCAGTTTCTAGGATCAACAACTGCACTATGCCTTGCCTTTATTTTCCCAGGAACTATTGCTTTAAGGGATGCTCTTGGCATATCAACAAGAAAAGACAAAATTATAGCACTGGTTATGATTATACTAGCTGTAGTGACAAGTGCAATTGCAATTTCTACCAACATATACAATGCTTTAAGTAGCAAGTCATAA 1311 0.4012 MSPSAGINVPLLPGSKSTAEHGTIPGAVFNVATSIIGSGIMSIPAILKVLGVFPSFALILIVAVLAEVSVDFLMRFTDAGAKTTYAGVMKEAFGPVGALTTKVFVIINNFGGLILLLIITGDVLSGKESGDEVHLGILQQWFGIHWWNSREVALLITLVLVMLPLVLYRRVESLKYSSAISTLLAVAFVAICSGLAIVALVQGKTQTPKLVPRLDYQTSFFDLFTAVPVVVTAFTFHFNVHPIGFELANPSDMKTAVRLAIMFCAFIYFTIGLFGYLLFGDSTQSDILINFDQSSDSTVGSLCNSLIRVSYALHIMLVFPILNFSLRANIDELLFPKKPLLATDNKRFVIITLLLLVFSYLAAIAIPDIWYFFQFLGSTTALCLAFIFPGTIALRDALGISTRKDKIIALVMIILAVVTSAIAISTNIYNALSSKS 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02171 436 PANTHER AMINO ACID TRANSPORTER 16 419 - -
Trre6g02171 436 Pfam Transmembrane amino acid transporter protein 22 422 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02171 Trre-Chr6 18362530 18367021 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02171 1 430 Amino Acid or Auxin Permease AAAP Family AT3G56200 58.430 6.94e-174 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02171 - - gmx:100815694 660.603