Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02162 ATGATTACCGTAGTCATACAGTTTTTCGATGCTTGTCTCAAACCATTAGGACAAACCTCCCTTGTATCACAGATTCTTGGAGGATTGGTATTTGGTCCATCAGTTTTGGGGCACAAAAAGATGCTGACAAGTATTTTATTCCCTATGAAAGGTTCTGTAATACTTAAAACAATGGCAACTTTCTGCTTAAATTTCTTCTACTTCATATGTTGTGTAAAGATGGATACAGTCACAATGCTGAAAACAGAAAAACAAGCCATCACAATTGGTATTTCTGTATTTGCATTAACATTAGGAGTCCCTCTTGGATTAGCCTTTACAATGATCAAATATGTAGCCATGGATAAAACCCTCGCGGACGCTCTCCCAGTAATAGCTGTCTCGCAAAGCTTAACCGTATTCATCAGCATATCAGTCCTTCTAGCAGAGCTTAAAATCCTTAACACGGACGTCGGACGTCTAACCTTATCGTCAGCAATGTTTGCTGATGTTGTTAGCTTCTCTATGTCGGTAATTATGTTTGCAGCATTGCAGACGAAAGCTGGTAATAGTAGTATGATAACAATAATATGGATCATTCTATCCATAATTGCACTCTTTGTTATTATCATATATGTAATGCGGCCAGCTATACTATGGTGTGCAGCCCGATTACATGGAAAGCCTATCGATGAACTTTGCATCCTTTGTATCATTCTATGTGTTCTCCTCACTGCACTTATTAGTGAGGTCATTGGACAGCATTTTGCTATGGGACCAATTCTTTTAGGCTTGGTTGTTCCTGAAGGGCCGCCTTTAGGAACAAGTTTGATAACGAAAATGGAGACGATTACTTGTGGTTTTTTGTATCCAATCTACCTTGCTGTCAGTGGATTGCAGACTGATGTCTTCAAAATCAACATGAAGTCTGTCTGGATTGTTACTGTCATAGTTATAGCCGGTTTCGTGGTGAAGATCGGTGGTGTTATGTTGCCAGGTTATTATTATAATGTTCCCATGAAAGAATGTTTTATGATTGGGCTCCTTCTTAATGGAAGAGGTATAGCTGAGCTTACCATGTACAATATATGGAAGGAAGGCAAGATACTAACAGAACAAGAGTTCGCTTTGATGGTGGTGTCTCTTCTAGTGATAAATGCTCTCATAGCACCACTGATAAACTTCCTATTTGATCCTTCAGCGCCATACCATTCAGGAAAGAGATGTTCAATACAACATACAAAGCGAGACTCCGAGCTCCGAATCATGGCATGCATTTACAAAGATGAAAACATCCCAACAATGCTCAATGTCATAGAAGCTTCATGTGCAAGCAAAGAGAGCAATGTTGCAGTTATAGCACTTCTCCTTGTAGAGATTCTGGGAAGATCAAGGCCTATTCTTGTTGCACACCAGCCCCACGACACACTTCGGACGACCAAAAGCCATTCACCTCGGCTCGACAATGCATTGAAACAATATGAACAGCTAAATGAAGGATGTGCATATATTCAATCATTCACCTCAATCTCCGACTTCGACACAATCCACGACGACGTTTGTCGAATAGCGCTCGACAGAAGAGCCAACATTTTGATAATGCCATTTCACAAAAGATGGGAAATAGATGGATCAGTTGAGGTAAACAATAGAGCAGTACAAGCAATAAACATTAAAGTCCTCGATAGAGCACCTTGTTCGGTCGGAATCCTCATAGACCGAGGCATCTTAAGCAGTTCTCCGTCGCTTTTAATAGCTAAATCAACATACTATGTTGCTGTCCTCTTCATAGGAGGTGCAGATGATGCTGAAGCACTAGCCTATGCTAGTAGAATGGCTAGACACGAATGCGTGAGTGTATCGGTGGTTAGATTCCTTGTTTTCGGAGAAGAGAATTCAAAAGATAGAAAACGTGACAGCGATCTTGTCGATGAATATAGATACTATAACGTCGGAAATACAAGGTTTGAGATAACAGAAGAAGTTGTGAAAGATGGAATAGAATTTTCTACAAGTATAAGAAGAATGATAGATTATTTTGATTTAGTTATTGTTGGAAGGGGACATCCACAATCAGTTTTGTTAAGAGGACATGATCAATGGAGTGAGTGTCCTGAGTTAGGTGTGATTGGTGATATGTTGGCTTCACAAGATTTTGTGACAAAGGCATCTGTGTTGGTTGTGCAACAACAAAGAATGGGAGGGAGATTGGTTGAACATAATATATTGACAAATCAAAGGGATCAGCTTGGACATGATGTTTCAATGGATGAACCACCAAGAGCTTCTTGTAGTATTTCTGTGGATAAATATCAAATGTAG 2301 0.3981 MITVVIQFFDACLKPLGQTSLVSQILGGLVFGPSVLGHKKMLTSILFPMKGSVILKTMATFCLNFFYFICCVKMDTVTMLKTEKQAITIGISVFALTLGVPLGLAFTMIKYVAMDKTLADALPVIAVSQSLTVFISISVLLAELKILNTDVGRLTLSSAMFADVVSFSMSVIMFAALQTKAGNSSMITIIWIILSIIALFVIIIYVMRPAILWCAARLHGKPIDELCILCIILCVLLTALISEVIGQHFAMGPILLGLVVPEGPPLGTSLITKMETITCGFLYPIYLAVSGLQTDVFKINMKSVWIVTVIVIAGFVVKIGGVMLPGYYYNVPMKECFMIGLLLNGRGIAELTMYNIWKEGKILTEQEFALMVVSLLVINALIAPLINFLFDPSAPYHSGKRCSIQHTKRDSELRIMACIYKDENIPTMLNVIEASCASKESNVAVIALLLVEILGRSRPILVAHQPHDTLRTTKSHSPRLDNALKQYEQLNEGCAYIQSFTSISDFDTIHDDVCRIALDRRANILIMPFHKRWEIDGSVEVNNRAVQAINIKVLDRAPCSVGILIDRGILSSSPSLLIAKSTYYVAVLFIGGADDAEALAYASRMARHECVSVSVVRFLVFGEENSKDRKRDSDLVDEYRYYNVGNTRFEITEEVVKDGIEFSTSIRRMIDYFDLVIVGRGHPQSVLLRGHDQWSECPELGVIGDMLASQDFVTKASVLVVQQQRMGGRLVEHNILTNQRDQLGHDVSMDEPPRASCSISVDKYQM 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02162 766 Gene3D - 1 394 IPR038770 -
Trre6g02162 766 Pfam Sodium/hydrogen exchanger family 12 381 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Trre6g02162 766 PANTHER CATION/H + ANTIPORTER 2 725 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02162 Trre-Chr6 18279139 18282266 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02162 13 723 Antiporter Super Family AT2G13620 35.984 6.15e-158 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02162 K26731 - gmx:100779700 990.334