Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02134 ATGAGAAAGTGGAAATTCAGCTTCTTTAAGGATCTTAGGAGAGTTATTTGGCTTGTTTTGTTTTGTTTTTTGTTACAGAGTTTTGGATTGTGCTGTTCTTTGAATGATGAAGGTAAAGCACTTTTGAAGTTCAAGCAAGGAATTTTGAGTGATCCTTTTGATGCTTTGTCAAATTGGGTTGATGATGAATTTGGTGTTGACCCTTGTAATTGGTTTGGAGTTGAATGTTCAGATGGAAGAGTTGTGGTATTGACGTTGAAAGACCTTTGTCTCGAAGGAAATCTAGCACATGAGCTTGGGAGCCTTGTTCACATAAAGTCTATTGTTTTGCGGAATAATTCTTTTCACGGGATCATTCCTGAAGGAATTGTATGCTTGAAGGAATTGGAGGTTTTGGATTTGGGCTACAACAACTTCAGCGGACCTTTACCTAAAGATATTGGGAGTAATATCTCATTATCAATCCTTTTGCTGGACAACAATGATCTTCTTTGTGGTTTCTCGCATGAAATTAGTGAATTGGTGATGATTTCTGAATCTCAAGTAGATGAAAACCAGCTAATTAGTGCCGGGAAATTGCCAGGTTGTACAGGAAGATCCACCAAATGGCATAATCGCAAAAGTAAAAAAGGTCTTCGGAGGCTACTGCAATCCCGTTTTATTCGTGATGATCCTCATAACCGGGAATCTATTCTTCCTGATAGTCCTTTGCTTTCTCCTTCTCCTTCTCCATCTCCATCCCCATCTCCTTCGCCATCTCTATCACCATCTCCTTCGCCTTCCCCATCTGCCTCAAAAGCACCACCAATAGTGCCAAAGCCGGCTTCCCCCAGTCGAAATGTTTCTGATTCTCCTTCTGCCTTGCCTGCACCACAATCGAAAAATACCAAATCAAAGAATCACATTCCTATTGTGGCTGGAATTGTGGGTGGTGCTGTATTTATTCTCATTTCAATCATTGTCGTATATCTCTTTAAAACCAACAAGGTAGCAACCGTTAAACCATGGGCTACTGGATTAAGTGGACAGCTTCAGAAGGCATTTGTGACAGGTGTGCCGAAGCTAAAGAGATCAGAACTTGAAGCGGCATGTGAAGATTTTAGTAATGTAATTGGTACTTCACCCATTGGTCAAGTGTTCAAAGGGACTCTATCTAGCGGTGTCGAAATAGCTGTGGCCTCTGTTACCACGACATCATTGAAAGATTGGTCGAAGACGTCAGAAGTCCAATTTCGTAAGAAGATAGAAACATTATCAAAGATGAACCACAAGAATTTCGTAAACCTTATTGGATATTGCGAAGAAGACGAGCCTTTCACCAGAATGGTGGTTTTTGAATATGCCCCAAATGGAACACTCTTTGAGCATTTACACATAAAAGAAGCTGAGCATTTGGATTGGGGAACAAGACTTAGAGTTGCAATTGGCACAGCTTACTGCCTACAACATATGCACCAGTTGGATCCTCCTTTCACCCACAGCGACCTAAATTCTTCATCTGTCCAACTAACTGACGACTATGCTGCCAAAATCTCGGACTTTAGTTTCTTGAACGAAATAGCTTCTGTTGATACAAAACCGGCTGCTAAGAAATACAACGAAGCGACATTAGCAAGTAACATTTACAGCTTCGGCATTATGTTACTAGAAATTGTAACAGGCCGTGTTCCTTATTCGATAGATAAAGATGGCCCACTTGAAAAATGGGCTTCACACTATTTACAAGAGAACCAGCCTCTCAAAGAAATAGTAGATCCAACACTAGCATCCTTCCAAGAAGAACAATTAGTACAAATCGGCGCATTGATTAAATCTTGTGTCAATGCTGATCAAGAGCAAAGACCAACAATAAAACAAGTTTGTGAGAGATTAAGAGAGATAACAAAAATAAGTCCTGAAGCAGCTGTTCCTAAACTTTCACCACTTTGGTGGGCAGAACTCGAGATTGCTTCTTTTGATGCAAGCTGA 1968 0.4055 MRKWKFSFFKDLRRVIWLVLFCFLLQSFGLCCSLNDEGKALLKFKQGILSDPFDALSNWVDDEFGVDPCNWFGVECSDGRVVVLTLKDLCLEGNLAHELGSLVHIKSIVLRNNSFHGIIPEGIVCLKELEVLDLGYNNFSGPLPKDIGSNISLSILLLDNNDLLCGFSHEISELVMISESQVDENQLISAGKLPGCTGRSTKWHNRKSKKGLRRLLQSRFIRDDPHNRESILPDSPLLSPSPSPSPSPSPSPSLSPSPSPSPSASKAPPIVPKPASPSRNVSDSPSALPAPQSKNTKSKNHIPIVAGIVGGAVFILISIIVVYLFKTNKVATVKPWATGLSGQLQKAFVTGVPKLKRSELEAACEDFSNVIGTSPIGQVFKGTLSSGVEIAVASVTTTSLKDWSKTSEVQFRKKIETLSKMNHKNFVNLIGYCEEDEPFTRMVVFEYAPNGTLFEHLHIKEAEHLDWGTRLRVAIGTAYCLQHMHQLDPPFTHSDLNSSSVQLTDDYAAKISDFSFLNEIASVDTKPAAKKYNEATLASNIYSFGIMLLEIVTGRVPYSIDKDGPLEKWASHYLQENQPLKEIVDPTLASFQEEQLVQIGALIKSCVNADQEQRPTIKQVCERLREITKISPEAAVPKLSPLWWAELEIASFDAS 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02134 655 MobiDBLite consensus disorder prediction 190 209 - -
Trre6g02134 655 SUPERFAMILY L domain-like 32 184 - -
Trre6g02134 655 Pfam Protein tyrosine and serine/threonine kinase 368 624 IPR001245 GO:0004672|GO:0006468
Trre6g02134 655 Gene3D Ribonuclease Inhibitor 33 214 IPR032675 -
Trre6g02134 655 MobiDBLite consensus disorder prediction 277 297 - -
Trre6g02134 655 Pfam Leucine rich repeat N-terminal domain 35 77 IPR013210 -
Trre6g02134 655 SUPERFAMILY Protein kinase-like (PK-like) 348 624 IPR011009 -
Trre6g02134 655 MobiDBLite consensus disorder prediction 237 275 - -
Trre6g02134 655 FunFam Inactive receptor-like serine/threonine-protein kinase 339 447 - -
Trre6g02134 655 Gene3D Transferase(Phosphotransferase) domain 1 448 636 - -
Trre6g02134 655 MobiDBLite consensus disorder prediction 223 297 - -
Trre6g02134 655 PANTHER PROTEIN MALE DISCOVERER 2 13 651 - -
Trre6g02134 655 Gene3D Phosphorylase Kinase; domain 1 337 447 - -
Trre6g02134 655 FunFam Nuclear pore complex protein NUP107 34 194 - -
Trre6g02134 655 ProSiteProfiles Protein kinase domain profile. 365 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02134 Trre-Chr6 18013311 18016600 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02134 18 628 Receptor kinase-like Gene Family AT1G66830 27.626 1.90e-54 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Trre6g02134 PK_Tyr_Ser-Thr 6.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02134 - - psat:127084000 1029.24