Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02124 ATGGGTAGTTCAGTGCGTGTTAAAGAAGTTGTGGTAGTGACACCTTCAGAGCCCACACCAAATGGTATCCTATTACTTTCACCACTCGACTCTCAACTTTTTCTTCGTTTCACTATAGAATATCTTCTAATTTACAGGCCCGGCCCGGGCCTAGACAAGGTTACAACAACTTCTCGTTTAAAAGCTGCATTAGCAAAAGCTCTTGTTCCTTATTACCCATTAGCTGGAAGAGTACGGCCCAGATCAGATAATAATTTGGGCCTCGAGGTATTATGTAAAGCCCAAGGAGCTGTTTTCATCGAAGCCGTTAGTGATCGTTACACCGTCAATGATTTTGAGAAAGTTCCAAAAACGGTTACTCAATGGAGAAAACTCTTGTCGTTTAGTGTTTCCGACGTTCTCAACGGATCTCCGCCGTTAATTGTTCAACTGACGTGGTTAACTGACGGCGCTGCTGCTTTGGGAGTTGGGTTTAACCACTGTATCTGCGACGGTATTGGTAGTGGCGAGTTTCTCAACTATGTTTCTGAATTGGTTTCTGGAAAACGCGGCGGTGCTAAACCGGAACCCGTTTGGGATCGTCATTTGTTCAGTGTTTCTCCGATGACTCGTGTTGACTCGGTGAGTCACATTCATCCCGAGTTCAACCGTGTACAAGATCTTTGCGGGTTTATGAACCGGGTCATAAATTGTCTCAGACCAACTTGCATTGTGTTCGATAAGCGACGGTTAAACGATCTCAAATTCGTGGCACGACGCACGTGTCAAATCTCCGAGCCATCGTTTACGTCATTTGAAGTTCTCGCTGCACACGTGTGGAGAAGCTGGGCGAGAGCAATGGGGTTTCCACCGAACCAGACTTTAAAGCTTTTGTTTAGCGTAAACGTGAGGAATCGGGTCAAACCGGGTTTACCCGATGGATACTACGGAAACGCGTTTGTTCTAGCGTGTGCGCAGACAAGTGCGAGGGAGTTAGGAGAGAGAGGAATCGGGTACGGGTCGGGTTTAGTGAAGAGAGCGAAGGAGAGAGTGGATAGTGAGCATGTCCGGAGAGTGGCTGAGTTTGTATCCGAGTCAAGAGCGAGTCCTGAGTTGGTGGGTGTGTTGATACTGTCACAGTGGTCGAGGTTGGGTTTGGACCGGGTTGAGATTGGAATGGAGAAACCGGTTGTGTTGCCCATATGCAGTGATAGGTACTGTTTGTTTTTGCCGGTGAAGGGTGAAAGAGATAGCGTCAAGGTCATGGTGGCTGTTCCTGCCGTCGCCTTTGATAACTACCACCGTTTTCTCAGGGAATAG 1299 0.4765 MGSSVRVKEVVVVTPSEPTPNGILLLSPLDSQLFLRFTIEYLLIYRPGPGLDKVTTTSRLKAALAKALVPYYPLAGRVRPRSDNNLGLEVLCKAQGAVFIEAVSDRYTVNDFEKVPKTVTQWRKLLSFSVSDVLNGSPPLIVQLTWLTDGAAALGVGFNHCICDGIGSGEFLNYVSELVSGKRGGAKPEPVWDRHLFSVSPMTRVDSVSHIHPEFNRVQDLCGFMNRVINCLRPTCIVFDKRRLNDLKFVARRTCQISEPSFTSFEVLAAHVWRSWARAMGFPPNQTLKLLFSVNVRNRVKPGLPDGYYGNAFVLACAQTSARELGERGIGYGSGLVKRAKERVDSEHVRRVAEFVSESRASPELVGVLILSQWSRLGLDRVEIGMEKPVVLPICSDRYCLFLPVKGERDSVKVMVAVPAVAFDNYHRFLRE 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02124 432 Pfam Transferase family 4 420 - -
Trre6g02124 432 Gene3D - 2 216 IPR023213 -
Trre6g02124 432 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 13 419 - -
Trre6g02124 432 Gene3D - 230 429 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02124 Trre-Chr6 17951870 17953168 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02124 5 432 Monolignol Biosynthesis Gene Families AT5G48930 25.000 5.68e-38 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02124 - - psat:127083994 717.613