Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02094 ATGAAGAAACCACCGTCCTCCTCCTCCTTCAACACCCATTTCACCGCCGTCACAATCATCATCATCATCTTCTTCTATCTTTCATCTTCTTCCAATGCTTTAGGCTCCGGCACCACCCTCTCCGTCACTGACTCTCCCGCCACCGTCTGCGGAATCACATCAGGCCAATCAAAACAGACCATTCAGTGTTACCGTCAAGGGAAAATTTTTCCCATCCTTCCCAACGTTTCATTTTCATCAATCTCCGGTGGAAGAAGCTACTTCTGTGGCCTAAGGTCCGGTAACTATAGTTTACATTGTTGGGATACTTTATCTTCGTTTCAAAGTAAAAGACTTTACGTTAATGATTCTGTTTTATTGGAGAATCTCTCCGTTGGAGATTCTCAAGTTTGCGCCACGGTGGTCGGAACCGGAGCAGTTCGTTGCTGGAGAACTAATGATGATTTTGAACCATCTGGGTCGGACCGATTCGGTTTGATTTCATCTGGGTCGAATTTTTCTTGTGGGATTTTGAAAAATGGTTCAAAAGTTCGGTGTTGGGGTGAGAAAGTTATTGCAGAACGGTTACAGAATGAATTTGGGAATATTTCTATGTTGAGTATTGTAGCTGGTGGTTCACATGTTTGTGGTTTGAATTCAACTGGTTTTTTGGTTTGTAAAGGAAGTAATAGTTCTGGACAAATTGATGTTCCAAAAGGTGGTGCTTTTGAGTATGGTGAATTGTCACTTGGTGATGAACATGGTTGTGCAATTAGAAGAAAGAATGGTTCTGTTATTTGTTGGGGTGGAAAAGGGAAATTTTTGGTGAATTTTATTGAAAGTGTTTCTTTTGAATTGATTGTTTCTGCTTCTAATTTTACTTGTGGATTGACAACAACTAATTTTTCTGTTATTTGTTGGGGACCTGGTTGGTCTATTGGATCAAATGGTTCTGAATCTGATGTTCCGTTGTCTCGAATTCTTCCGGGGCCTTGTGTTCAATCTTCTTGTAGTGAGTGTGGTATATATCCTGATTCTCAATCATTGTGTTCTAGCACAAGTCATCATATTTGTAAGCCAAATATATGTAACACTCAAATAACAAGTCCGCCAATGCAGCCGCCATCTGTTCAACCACCTCCTCCTCCACCACCACCGGTGTCTCCTTCTCGATCGAAGACATTGACGAGGGGATTATTGATTTTTGCAATTGTTGGATCAGTGGGAGGTTTTATTGGTATATGTGCAATAATCTATTGCTTATGGACAGGTGTTTGTTTTGGTAAAAAGAAAGTGCACAATTCTGTGCAACCAACAGTTACAAGAGGTAGTAGCAGCGGTTCAAATACTAGTTCGTCTTCGATTAAATCGGTGATTATGCGTCAAGGTTCGAGAATAATGAGGCGGCAGAGGAGTGGACCGTCAACTAAGCATCAAGAAAGGGCAGAGGAGTTTTCTCTATCTGAGCTTATAGCAGCTACAAATCATTTCTCACTACAGAACAAAATTGGTGCCGGAAGCTTTGGTATTGTCTATAGAGGAAAATTATTTGACGGTCGTGAGGTAGCAATCAAGAGAGGTGAAACAGGTTTGAAAGTTAAAAAGTTTCAAGAGAAAGAGAGTGCATTCGAGTCAGAATTAGCTTTTTTGTCGCGTTTACACCACAAACACTTGGTTAGACTAGTTGGTTATTGTGAGGAGAAAGATGAGAGGCTTTTGGTGTATGAGTACATGAAGAATGGTTCATTGCATAGTCATTTGCATGATAAGAACAATGTGGAAAAAAGTAGCAGTTTGTTGAATTCATGGAATATGAGGATCAAAATTGCATTGGATGCTTCAAGAGGAATAGAGTATCTGCATAATTATGCAGTTCCTTCAATAATTCATAGAGATATTAAGTCTTCAAATATTCTTCTTGATGCAACTTGGACAGCAAGAGTATCTGATTTTGGATTATCATTGATGAGTCCAGAATCTGATATCAATTACAAACCAACAAAAACAGCAGGAACGGTTGGTTATATCGATCCCGAGTACTATGGTTTAAATGTGTTAACAGCAAAGAGTGATGTATATGGACTTGGAGTTGTATTACTTGAATTGTTAACAGGAAAAAGAGCTATATTCCGAAACGATGAAGATGAAGGAAATCCATCGAGTCTAGTAGATTTTGCAGTGCCTGCTATTTTAGCTGGTGAATTAGTGAAAATTTTGGACTCGAGAGTTGGACTGCCGGAGGCGGAGAGTAATGAATCTGAGGCGGTCGAGTTAATGGCGTATACTGCTGTACATTGTGTGAATTTGGAAGGGAAAGATAGACCAACTATGGCCGATATTGTTGCGAATTTGGAGAGGGCATTGCTTATTTGTGAAGGTGGTAGTAACAATGAGATTGAAAGCATTTCCAGTGTTACTATCTCTATTGTTTCAGATTGA 2418 0.3983 MKKPPSSSSFNTHFTAVTIIIIIFFYLSSSSNALGSGTTLSVTDSPATVCGITSGQSKQTIQCYRQGKIFPILPNVSFSSISGGRSYFCGLRSGNYSLHCWDTLSSFQSKRLYVNDSVLLENLSVGDSQVCATVVGTGAVRCWRTNDDFEPSGSDRFGLISSGSNFSCGILKNGSKVRCWGEKVIAERLQNEFGNISMLSIVAGGSHVCGLNSTGFLVCKGSNSSGQIDVPKGGAFEYGELSLGDEHGCAIRRKNGSVICWGGKGKFLVNFIESVSFELIVSASNFTCGLTTTNFSVICWGPGWSIGSNGSESDVPLSRILPGPCVQSSCSECGIYPDSQSLCSSTSHHICKPNICNTQITSPPMQPPSVQPPPPPPPPVSPSRSKTLTRGLLIFAIVGSVGGFIGICAIIYCLWTGVCFGKKKVHNSVQPTVTRGSSSGSNTSSSSIKSVIMRQGSRIMRRQRSGPSTKHQERAEEFSLSELIAATNHFSLQNKIGAGSFGIVYRGKLFDGREVAIKRGETGLKVKKFQEKESAFESELAFLSRLHHKHLVRLVGYCEEKDERLLVYEYMKNGSLHSHLHDKNNVEKSSSLLNSWNMRIKIALDASRGIEYLHNYAVPSIIHRDIKSSNILLDATWTARVSDFGLSLMSPESDINYKPTKTAGTVGYIDPEYYGLNVLTAKSDVYGLGVVLLELLTGKRAIFRNDEDEGNPSSLVDFAVPAILAGELVKILDSRVGLPEAESNESEAVELMAYTAVHCVNLEGKDRPTMADIVANLERALLICEGGSNNEIESISSVTISIVSD 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02094 805 Pfam Protein kinase domain 491 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g02094 805 SUPERFAMILY RCC1/BLIP-II 240 306 IPR009091 -
Trre6g02094 805 Gene3D Transferase(Phosphotransferase) domain 1 571 791 - -
Trre6g02094 805 MobiDBLite consensus disorder prediction 362 384 - -
Trre6g02094 805 ProSiteProfiles Protein kinase domain profile. 490 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g02094 805 ProSitePatterns Protein kinases ATP-binding region signature. 496 518 IPR017441 GO:0005524
Trre6g02094 805 SMART serkin_6 490 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g02094 805 SUPERFAMILY Protein kinase-like (PK-like) 470 777 IPR011009 -
Trre6g02094 805 MobiDBLite consensus disorder prediction 453 472 - -
Trre6g02094 805 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 196 788 IPR044815 GO:0004674
Trre6g02094 805 MobiDBLite consensus disorder prediction 365 383 - -
Trre6g02094 805 FunFam serine/threonine-protein kinase-like protein CCR1 459 570 - -
Trre6g02094 805 Gene3D - 30 190 IPR009091 -
Trre6g02094 805 Gene3D - 191 335 IPR009091 -
Trre6g02094 805 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Trre6g02094 805 SUPERFAMILY RCC1/BLIP-II 26 263 IPR009091 -
Trre6g02094 805 Gene3D Phosphorylase Kinase; domain 1 451 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02094 Trre-Chr6 17712244 17714661 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02094 12 805 Receptor kinase-like Gene Family AT3G55950 58.696 0.0 827
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Trre6g02094 Pkinase 5.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02094 - - gmx:100786639 1095.11