Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02081 ATGGATGATGAACATAAACATGTCTTGCCTTCAAAAGTTTCAGTATGTTACTCAACGGGTGTGTCTAATGGCAATGATATATGGCAAAGTGATAGTGTTTTACCATTTTTCCTTCCTAGTTTTGCAGCTCAAATTGCTTTCATGTTGTTCACTAATCGTTTTTTGTACTATCTCCTTAGACCCTTTAATCAACCTCGTCTTGTTGCTGAAATTTTGACAGGTTTCTTGTTAAGTCCAGAAATACTTGGGAAAACAAAATTTATTGAACATTTGGTCCCTCTAAAGTTAGTGATAGCAAGTGATACCATATCATATATTGGACTAGTTTACTATGTATTTCTTGCTGGCTTAGACATGAACTTGGAAACTATCATGAAAGCAAGAAAAAAGGCTACAAGCATTGCTGTTGCAGGCACAATAATTCCAATGGTAATGGGGGGTGCAATATACACTTTATTTCAAAGCATGTTAACAGCAAGTCCTGAATATTTCTCACAATACAACACACCTAAAGCTTATTTATTTTGGACATTAATCTTTAGTGTCACTGGTTTTCCAATTGTTACTCAAATCCTAGCAGATTTGAAACTCCTCTATACAGGTTTAGGTAGAGTGGCTTTAACAGCAGCAATGATTAATGACTTCATCAATTGGATTATGTTTGCTTTGTTGATTCCTTTTGAACATGATGAAAAGGTTGCTATGTACTCATTTTTAAGTACAATAGCATTTATCTTTATTTGTTTCGTCGTGATTCGGCCTTATCTCGTTGAGTTAATTGTTCGAAAAACAAAACAGAATGATTGGGACAATTATCAGTTGTTTTTTGTTGTCATGGGTGTTTATGTTTGTGCAACTGTTACTGATCTTCTTGGAACACATCCTGTTGTTGGGGCTTTAGTGTATGGAATAATGCTTCCGCGCGGTAAATTTACCAATATGTTGATAGAGAAGACAGAAGATTTTGGATCTGTTTATCTTGTTCCACTCTTCTTTGCTACCTGTGGTATGAGACTTCAAATATTTGCTGTCATTAAAGCTCAAGGTTTGGCAATTGTGGCTATGGTTTTGGTCTTGTCATTTATCCCTAAGATTCTAAGCACTGTCATAGCAACAAGGTTCTTTGGTATGCCTGCTCTTGATGGTGTGGCTATTGGATTGCTTATGAACACCAAAGGCATCTTACCTCTAATAATGCTCAACCTTGCCTGGGACAAACAGATTTTGAGTGTGGAGTCCTCCTCAATTATGATGGTATCTGTTCTTATAATGACAGTAGCAGTACCTCTTATAATTAATGCCATATACAAACCAAGAAAGATATACAAGCAAAACAAGCTAAGGACAATACAGAATTTAAAGGTTGAAGCAGAACTAAGAGTTTTAGCTTGTGTTCACAACCCTCGTCATGCCACAGGATTCATCAACATTCTCGAAGCTTCTAACGCCATGGAAATCTCTTCTTTACGCATATTCGCTCTTCAACTAGTTGAATTAACAGGAACAAAAATATCCCTTTTAGCAGCACACATCAACACACAAAGTGGTTCAGAAGCTCTCACACAGTCAGAAGAAGACTTAGAAAACATAACACTCACTTTCAAAGACTATGAAGAACAAAATGAAAACACTAGGGTTGAAACACTTGCTGCAGTTTCAACCTACTCAACTATTCATCAAGACATACACACTGTAGCACAGGAAAAGCAAGCAACATTGATTCTCCTTCCTTTTCACAAACAACCAAATATTGAAAGTATCCTAGAAACAACAAATGAAGCCTTTCAAAATATAAACCAAAATGTGATGAGAGAGGCGCCATGTTCTGTTGGAATCTTCGTTGATCGCGGTCTCGGTTCATTGTTCAAAGTTAGTTTACGTGTACTCATGCTTTTCATCGGCGGTCCTGATGACCGCGAAGCATTAGCATTGGCATGGAGGATGTCGAAGCATGAATCAATTCAACTATCTGTTGTGAGAGTTCATCTGTTAGGACAAGCTACAGAAGTTGATTCATCACTACAAGCAGAATCGAGAGGACTATTATCTGCAGTGTTGGATAGTGAAAAGCAAAAAGAGCTTGATGATGAATATGTGAATACTTTTAGACTCAAAGCACTGCACAGTAAGGATTCTACAAGTTATTCAGACAAAGAAGTTCATTCTCGCGAAGACCTTACTCAAGTGTTGAATGACTTGGACAAATATGGATATGATTTGTACATTCTAGGACAAGGAACAGGTAGAAATTCTTCAGTGTTCTCGGAGTTAATGAAATGGACTGATTGTCCTGAACTTGGTGTTATAGGAGACATGGTGGCATCAAATAATTTTGGTTCGTGTTCTTCATTACTAGTTGTACAACAGTATGGGTTTGGCGGAATGGTTTTTGAGAATAATACTCATTCTCAACATCATGGTCATGGTCAAGGGGCTAAAAATGATCATGATGATGATGATAGTGAATCTGGGAATGTTTTTGTGAGGGTAGAATAA 2496 0.3714 MDDEHKHVLPSKVSVCYSTGVSNGNDIWQSDSVLPFFLPSFAAQIAFMLFTNRFLYYLLRPFNQPRLVAEILTGFLLSPEILGKTKFIEHLVPLKLVIASDTISYIGLVYYVFLAGLDMNLETIMKARKKATSIAVAGTIIPMVMGGAIYTLFQSMLTASPEYFSQYNTPKAYLFWTLIFSVTGFPIVTQILADLKLLYTGLGRVALTAAMINDFINWIMFALLIPFEHDEKVAMYSFLSTIAFIFICFVVIRPYLVELIVRKTKQNDWDNYQLFFVVMGVYVCATVTDLLGTHPVVGALVYGIMLPRGKFTNMLIEKTEDFGSVYLVPLFFATCGMRLQIFAVIKAQGLAIVAMVLVLSFIPKILSTVIATRFFGMPALDGVAIGLLMNTKGILPLIMLNLAWDKQILSVESSSIMMVSVLIMTVAVPLIINAIYKPRKIYKQNKLRTIQNLKVEAELRVLACVHNPRHATGFINILEASNAMEISSLRIFALQLVELTGTKISLLAAHINTQSGSEALTQSEEDLENITLTFKDYEEQNENTRVETLAAVSTYSTIHQDIHTVAQEKQATLILLPFHKQPNIESILETTNEAFQNINQNVMREAPCSVGIFVDRGLGSLFKVSLRVLMLFIGGPDDREALALAWRMSKHESIQLSVVRVHLLGQATEVDSSLQAESRGLLSAVLDSEKQKELDDEYVNTFRLKALHSKDSTSYSDKEVHSREDLTQVLNDLDKYGYDLYILGQGTGRNSSVFSELMKWTDCPELGVIGDMVASNNFGSCSSLLVVQQYGFGGMVFENNTHSQHHGHGQGAKNDHDDDDSESGNVFVRVE 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02081 831 PANTHER CATION/H + ANTIPORTER 15 790 - -
Trre6g02081 831 MobiDBLite consensus disorder prediction 808 831 - -
Trre6g02081 831 Gene3D - 40 445 IPR038770 -
Trre6g02081 831 Coils Coil 520 547 - -
Trre6g02081 831 MobiDBLite consensus disorder prediction 801 831 - -
Trre6g02081 831 Pfam Sodium/hydrogen exchanger family 48 433 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02081 Trre-Chr6 17624740 17627734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02081 15 790 Antiporter Super Family AT2G13620 38.041 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02081 - K26731 gmx:100802381 1084.71