Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02073 ATGGCTTTTTTTCTCTTCTTCATCATTTTCATTGTCTTTCTCTTCCTTCTCAGAAAACTCCGTTACTCGAAACTCCGGTTACCGCCGGGGAGTCTCGGTTTACCGTTCATCGGAGAAACGTTACAGATGATATCAGCATACAAAAGTGACAATCCTGAACCTTTCATCGACAAGAGAGTGAACCGGTACGGTTCAATTTTCACTAGTCATGTTTTTGGTGAACCGACAGTTTTCTCGGCTGACCCGGAAACGAACCGGTTTATTCTTATGAATGAGAAGCTTTTTGAAAGTAGCTACCCCGGTTCAATATCGAACCTTCTTGGAAAACACTCGTTGCTTCTCATGAAGGGTTCTCTTCACAAGAAAATGCATTCTCTTACTATGAGTTTCGCTAATTCTACCATTATTAAGGATCATCTTCTCTTTGATATAGACCGGCTTATTCGGCTCAATATGGATTCTTGGTCCGACCGGGTTCTTCTCATGGAGGAGGCTAAGAAGATAACATTTGAGCTAACAGTAAAACAACTTATGAGCTTTGATCCAGATGAATGGACTGAGAATTTAAGAAAAGAGTACATGCTTGTGATTAATGGCTTTTTCACTCTCCCTTTTCCTCTTTTCTCTGCCACCTACCGCAAAGCCATCAAGGCAAGAACAAAGGTGGCAGAGGCATTGACACTAGTAGTGAGGCAGAGGAGAAAAGAGAGTGATATAAACAAAGAGAAAAAGAATGACATACTTGGAGCATTGTTGGCATCTGGTGAACAATTATTGGATGAACAAATAGTGGATTTTATGTTGGCTTTGCTCATAGCTGGTTATGAAACAACTTCTACTATAATGACTCTTGCTATCAAGTTCCTCACTGAGACTCCTTTAGCCTTGGCACAACTCAAGGAAGAGCATGACCAAATCAGAGCAAGGAGTGAGCCAGAGGCACCACTAGAATGGACAGATTACAAGTCAATGGCATTTACTCAATGTATTGTGAATGAGACCTTGAGAGTGGCAAACATAATTGGTGCGGTGTTTAGGAGAGCAACAACAGACATCGACATAAAAGGTTACACTATTCCTAAGGGATGGAAGGTGATTGCATCATTTCGTGCTGTGCATTTGAATGCTGAACATTTCAAAGAAGCACGCACCTTCAATCCATGGAGATGGCAGAATAACAATAAATCAGAAGCTGTAGCAAGCCCTGTGAATGTCTTTACACCATTTGGAGGAGGACCAAGGTTGTGCCCTGGCTATGAGCTAGCTAGAGTTGTACTTTCGGTCTTCCTTCACCGCATGGTCACTCGCTTCAGTTGGGTTCCTGCTGAAGAAGATAAGTTGGTGTTTTTTCCAACCACTAGGACACAGAAGAGGTACCCTATTATACTGAAGCGGAGAGAAGAAACAAGATCAAGCATTGGAATTGGGAACACAGCAGCAGATACAGGAAGGCAGAAAGAGAACTGA 1467 0.4226 MAFFLFFIIFIVFLFLLRKLRYSKLRLPPGSLGLPFIGETLQMISAYKSDNPEPFIDKRVNRYGSIFTSHVFGEPTVFSADPETNRFILMNEKLFESSYPGSISNLLGKHSLLLMKGSLHKKMHSLTMSFANSTIIKDHLLFDIDRLIRLNMDSWSDRVLLMEEAKKITFELTVKQLMSFDPDEWTENLRKEYMLVINGFFTLPFPLFSATYRKAIKARTKVAEALTLVVRQRRKESDINKEKKNDILGALLASGEQLLDEQIVDFMLALLIAGYETTSTIMTLAIKFLTETPLALAQLKEEHDQIRARSEPEAPLEWTDYKSMAFTQCIVNETLRVANIIGAVFRRATTDIDIKGYTIPKGWKVIASFRAVHLNAEHFKEARTFNPWRWQNNNKSEAVASPVNVFTPFGGGPRLCPGYELARVVLSVFLHRMVTRFSWVPAEEDKLVFFPTTRTQKRYPIILKRREETRSSIGIGNTAADTGRQKEN 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02073 488 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 409 418 IPR017972 GO:0005506|GO:0016705
Trre6g02073 488 FunFam Cytochrome P450 90A1 17 466 - -
Trre6g02073 488 SUPERFAMILY Cytochrome P450 20 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g02073 488 PRINTS P450 superfamily signature 416 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g02073 488 PRINTS P450 superfamily signature 329 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g02073 488 PRINTS P450 superfamily signature 273 290 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g02073 488 PRINTS P450 superfamily signature 407 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g02073 488 PANTHER CYTOCHROME P450 26 23 440 - -
Trre6g02073 488 PRINTS E-class P450 group I signature 262 279 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g02073 488 PRINTS E-class P450 group I signature 328 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g02073 488 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g02073 488 PRINTS E-class P450 group I signature 368 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g02073 488 PRINTS E-class P450 group I signature 406 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g02073 488 PRINTS E-class P450 group I signature 282 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g02073 488 PRINTS E-class P450 group I signature 416 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g02073 488 Pfam Cytochrome P450 197 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g02073 488 CDD CYP90-like 59 465 - -
Trre6g02073 488 Gene3D Cytochrome P450 18 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02073 Trre-Chr6 17554843 17561088 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02073 115 467 Cytochrome P450 AT5G05690 76.771 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02073 K09588 - gmx:100775886 775.778