Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02050 ATGGGTAACAATTTGCACCAACTACTCAGAAGTCTTTGTTTCAATACTCATTGGAATTATGCAATCTTTTGGAAGCTCAAACATTGTGCTCCAATGATCTTGACATTGGAGGATGCTTACTATGACAATTTGGATTATGTTGACTCTTCAGAAAATAAGTACTGTCAGAAGAACTTGGAACAGATTGCCGGTGGGAAATTTTCACATGATGCTCTTGGGTTAGCTGTGGCAAAGATGTCATATAATGTATATTCATTAGGGGAAGGTATTGTTGGACAGGTAGCTGTTACTGGAAAACATCGGTGGATCTGTGCAGATAATCAAGTTACAAGTTCTGGTTTGTCTTTCGAGTTTGCTGATGGGTGGCAATCTCAGTTTTCTGCTGGAATTAGGACAATGGTCGTTGTGTCTGTAATCCCACTAGGCGTCGTTCAGCTTGGTTCTCTAACAAAAGTGAATGAAGATATAGGGGTTATTAATCATATAAGAAATCTTTTTTTCTCTACTCAAGGTCATTCGATAGACCACATTCCGAGTCAAATAGAAAGTAATTTGAAGAGCTCTTCATCTCAGCCGGGTGTCTTGAAGGAAAATTTGTTTTCAGATATTATGGCTGTGTGCTTACCTGATACCGAGAGAACTATGAGGAATGAAACAGTGGATGTTTTGAGGCCCCTTCAATGTTCTGGGAGGAACAATTCAACTCATTCTGCTTATTGGGAAATGAGTGATGATATGGTCAAGCATGAAGGATCCGAACTCTATAGTGACGTGAGTCCCATTTTGCTTCAGTCAATGTCCGATATGATTAATGTGGAGCATCAGGAAGGGTCTAGTAGTGTCTGCAAAAATATGAGATTTGAATCGGAACAAATTCTGTCATCATTTTTGAACACTTCTGCTATAAATAATGTTGGTGTTAATGATTTAATCTATCATTCAGAAAAGGCCAGAGTTGATTCTGCATGTTTTCCAACTGTTTCTATCAATGCCAATATTTGTGAAAGTGGTAAGTTGCATTATGTGGATACTCACCAAAAAGGGGTGTTGAATATTTCCAAACCTTTAAGTGCTAACTCCTATAAACATACCGAAAAGTCGGAGTTTCAAGTTGGCTCTTGCGACAAGGATACCTCGTACTTTCAAACTGAGCCGATGAAGTTTCCGGCTGGCTGTGAACTATATGAAGCACTTGGACCAGCTTCTTTGAAAGGGAGTAAATATTTTGATTTGCTAGCACAGGTTAATCAGGATATGAAAATTGTGGATATTCCAGATGCGATTAACGCTAGTCAATTGACTTCTGAATCTCTTCCAGATCATCTTTTGGAAGCAATGGTGGCCAACATTAGTCACAGTAGTAATAATGATGTCAATAGTGAATTATCCTTTTGTAGATCAATGCAATCTGCAATTAGTTCTGGAAAAACACCTGAAGCTTCTATTCACAATGTGCATACTATAGATCATCCTTCTCTTGTCAGAGAGGACAAACATCATAGTTTGAGTTCATCATCAGGGATATGTGGTGTGATGTCATCTAAAGGTGTTTCTTCTACATGTCCTAGTGCTTGTAGTGAACAACTTGAAAGGTCTTCTGAACCGTCTAAGAACAGCAAGAAGAGGGCTAGGCCCGGAGAAAGTTGCAGACCTCGTCCAAGAGACAGGCAACTGATCCAAGATCGAATTAAGGAGCTGAGAGAGCTGGTGCCAAATGGAGCAAAGTGCAGTATTGATTCACTACTGGAGCGCTCGATAAAGCACATGCTTTTTCTGCAAGGCGTAACTAAGCATGCTGACAAGCTAACTAAATTTGCTGATACTAAATCAAAGTTGCATCATATGGAAACAGATATTCTTGGATCCTCTAGTTCAGAGCAAGGTTCAAGTTGGGCAGTGGAGGTAGGGGGTCATCTGAAAGTTCATTCAATATTAGTCGAGAATCTTAGCAAGAATGGACAGATGCTTGTTGAGATGTTATGCGAGGAATGCAGCCATTTTCTTGAAATAGCAGAAGCTATAAAAAGCTTGGGCCTTACAATTTTGAAGGGTGTAACAAAAGCTCGTCGGGATGAGAAGATATGTATATGCTTTATTGTTGAGGGTGAAAACAACAGAAATGTACACAGATTGGACATCTTGTGGCCGCTTGTTCAGATACTGCAATCCAAGAGTATTGTGTATCCACAGTAA 2193 0.3963 MGNNLHQLLRSLCFNTHWNYAIFWKLKHCAPMILTLEDAYYDNLDYVDSSENKYCQKNLEQIAGGKFSHDALGLAVAKMSYNVYSLGEGIVGQVAVTGKHRWICADNQVTSSGLSFEFADGWQSQFSAGIRTMVVVSVIPLGVVQLGSLTKVNEDIGVINHIRNLFFSTQGHSIDHIPSQIESNLKSSSSQPGVLKENLFSDIMAVCLPDTERTMRNETVDVLRPLQCSGRNNSTHSAYWEMSDDMVKHEGSELYSDVSPILLQSMSDMINVEHQEGSSSVCKNMRFESEQILSSFLNTSAINNVGVNDLIYHSEKARVDSACFPTVSINANICESGKLHYVDTHQKGVLNISKPLSANSYKHTEKSEFQVGSCDKDTSYFQTEPMKFPAGCELYEALGPASLKGSKYFDLLAQVNQDMKIVDIPDAINASQLTSESLPDHLLEAMVANISHSSNNDVNSELSFCRSMQSAISSGKTPEASIHNVHTIDHPSLVREDKHHSLSSSSGICGVMSSKGVSSTCPSACSEQLERSSEPSKNSKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLERSIKHMLFLQGVTKHADKLTKFADTKSKLHHMETDILGSSSSEQGSSWAVEVGGHLKVHSILVENLSKNGQMLVEMLCEECSHFLEIAEAIKSLGLTILKGVTKARRDEKICICFIVEGENNRNVHRLDILWPLVQILQSKSIVYPQ 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02050 730 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 725 IPR043561 GO:0003700|GO:0006355
Trre6g02050 730 MobiDBLite consensus disorder prediction 533 558 - -
Trre6g02050 730 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 543 592 IPR011598 GO:0046983
Trre6g02050 730 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 166 IPR025610 -
Trre6g02050 730 MobiDBLite consensus disorder prediction 527 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02050 Trre-Chr6 17301891 17306848 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02050 1 725 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 39.820 6.23e-149 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02050 - - mtr:25499239 1021.15