Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02049 ATGATGGGTAACAATTTGCACCAACTACTCAGAAGTCTTTGTTTCAATACTCATTGGAATTATGCAATCTTTTGGAAGCTCAAACATTGTGCTCCAATGATCTTGACATTGGAGGATGCTTACTATGACAATTTGGATTATGTTGACTCTTCAGAAAATAAGTACTGTCAGAAGAACTTGGAACAGATTGCCGGTGGGAAATTTTCACATGATGCTCTTGGGTTAGCTGTGGCAAAGATGTCATATAATGTATATTCATTAGGGGAAGGTATTGTTGGACAGGTAGCTGTTACTGGAAAACATCGGTGGATCTGTGCAGATAATCAAGTTACAAGTTCTGGTTTGTCTTTCGAGTTTGCTGATGGGTGGCAATCTCAGTTTTCTGCTGGAATTAGGACAATGGTCGTTGTGTCTGTAATCCCACTAGGCGTCGTTCAGCTTGGTTCTCTAACAAAAGTGAATGAAGATATAGGGGTTATTAATCATATAAGAAATCTTTTTTTCTCTACTCAAGGTCATTCGATAGACCACATTCCGAGTCAAATAGAAAGTAATTTGAAGAGCTCTTCATCTCAGCCGGGTGTCTTGAAGGAAAATTTGTTTTCAGATATTATGGCTGTGTGCTTACCTGATACCGAGAGAACTATGAGGAATGAAACAGTGGATGTTTTGAGGCCCCTTCAATGTTCTGGGAGGAACAATTCAACTCATTCTGCTTATTGGGAAATGAGTGATGATATGGTCAAGCATGAAGGATCCGAACTCTATAGTGACGTGAGTCCCATTTTGCTTCAGTCAATGTCCGATATGATTAATGTGGAGCATCAGGAAGGGTCTAGTAGTGTCTGCAAAAATATGAGATTTGAATCGGAACAAATTCTGTCATCATTTTTGAACACTTCTGCTATAAATAATGTTGGTGTTAATGATTTAATCTATCATTCAGAAAAGGCCAGAGTTGATTCTGCATGTTTTCCAACTGTTTCTATCAATGCCAATATTTGTGAAAGTGGTAAGTTGCATTATGTGGATACTCACCAAAAAGGGGTGTTGAATATTTCCAAACCTTTAAGTGCTAACTCCTATAAACATACCGAAAAGTCGGAGTTTCAAGTTGGCTCTTGCGACAAGGATACCTCGTACTTTCAAACTGAGCCGATGAAGTTTCCGGCTGGCTGTGAACTATATGAAGCACTTGGACCAGCTTCTTTGAAAGGGAGTAAATATTTTGATTTGCTAGCACAGGTTAATCAGGATATGAAAATTGTGGATATTCCAGATGCGATTAACGCTAGTCAATTGACTTCTGAATCTCTTCCAGATCATCTTTTGGAAGCAATGGTGGCCAACATTAGTCACAGTAGTAATAATGATGTCAATAGTGAATTATCCTTTTGTAGATCAATGCAATCTGCAATTAGTTCTGGAAAAACACCTGAAGCTTCTATTCACAATGTGCATACTATAGATCATCCTTCTCTTGTCAGAGAGGACAAACATCATAGTTTGAGTTCATCATCAGGGATATGTGGTGTGATGTCATCTAAAGGTGTTTCTTCTACATGTCCTAGTGCTTGTAGTGAACAACTTGAAAGGTCTTCTGAACCGTCTAAGAACAGCAAGAAGAGGGCTAGGCCCGGAGAAAGTTGCAGACCTCGTCCAAGAGACAGGCAACTGATCCAAGATCGAATTAAGGAGCTGAGAGAGCTGGTGCCAAATGGAGCAAAGTGCAGTATTGATTCACTACTGGAGCGCTCGATAAAGCACATGCTTTTTCTGCAAGGCGTAACTAAGCATGCTGACAAGCTAACTAAATTTGCTGATACTAAATCAAAGTTGCATCATATGGAAACAGATATTCTTGGATCCTCTAGTTCAGAGCAAGGTTCAAGTTGGGCAGTGGAGGTAGGGGGTCATCTGAAAGTTCATTCAATATTAGTCGAGAATCTTAGCAAGAATGGACAGATGCTTGTTGAGATGTTATGCGAGGAATGCAGCCATTTTCTTGAAATAGCAGAAGCTATAAAAAGCTTGGGCCTTACAATTTTGAAGGGTGTAACAAAAGCTCGTCGGGATGAGAAGATATGTATATGCTTTATTGTTGAGGGTGAAAACAACAGAAATGTACACAGATTGGACATCTTGTGGCCGCTTGTTCAGATACTGCAATCCAAGAGTATTGTGTATCCACAGTAA 2196 0.3962 MMGNNLHQLLRSLCFNTHWNYAIFWKLKHCAPMILTLEDAYYDNLDYVDSSENKYCQKNLEQIAGGKFSHDALGLAVAKMSYNVYSLGEGIVGQVAVTGKHRWICADNQVTSSGLSFEFADGWQSQFSAGIRTMVVVSVIPLGVVQLGSLTKVNEDIGVINHIRNLFFSTQGHSIDHIPSQIESNLKSSSSQPGVLKENLFSDIMAVCLPDTERTMRNETVDVLRPLQCSGRNNSTHSAYWEMSDDMVKHEGSELYSDVSPILLQSMSDMINVEHQEGSSSVCKNMRFESEQILSSFLNTSAINNVGVNDLIYHSEKARVDSACFPTVSINANICESGKLHYVDTHQKGVLNISKPLSANSYKHTEKSEFQVGSCDKDTSYFQTEPMKFPAGCELYEALGPASLKGSKYFDLLAQVNQDMKIVDIPDAINASQLTSESLPDHLLEAMVANISHSSNNDVNSELSFCRSMQSAISSGKTPEASIHNVHTIDHPSLVREDKHHSLSSSSGICGVMSSKGVSSTCPSACSEQLERSSEPSKNSKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLERSIKHMLFLQGVTKHADKLTKFADTKSKLHHMETDILGSSSSEQGSSWAVEVGGHLKVHSILVENLSKNGQMLVEMLCEECSHFLEIAEAIKSLGLTILKGVTKARRDEKICICFIVEGENNRNVHRLDILWPLVQILQSKSIVYPQ 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02049 731 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 544 593 IPR011598 GO:0046983
Trre6g02049 731 MobiDBLite consensus disorder prediction 534 559 - -
Trre6g02049 731 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 2 726 IPR043561 GO:0003700|GO:0006355
Trre6g02049 731 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 6 167 IPR025610 -
Trre6g02049 731 MobiDBLite consensus disorder prediction 528 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02049 Trre-Chr6 17301891 17306851 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02049 2 726 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 39.820 6.35e-149 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02049 - - mtr:25499239 1021.15