Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02048 ATGGGCTGGGATTGTGTGGTACTGCAAACAGTTGGAAGAGAACCGCCATTAAAACGGCGAGCAGGATTGCGGAGGAAACAAGCTGGAAGAGGGATCTTGACATTGGAGGATGCTTACTATGACAATTTGGATTATGTTGACTCTTCAGAAAATAAGTACTGTCAGAAGAACTTGGAACAGATTGCCGGTGGGAAATTTTCACATGATGCTCTTGGGTTAGCTGTGGCAAAGATGTCATATAATGTATATTCATTAGGGGAAGGTATTGTTGGACAGGTAGCTGTTACTGGAAAACATCGGTGGATCTGTGCAGATAATCAAGTTACAAGTTCTGGTTTGTCTTTCGAGTTTGCTGATGGGTGGCAATCTCAGTTTTCTGCTGGAATTAGGACAATGGTCGTTGTGTCTGTAATCCCACTAGGCGTCGTTCAGCTTGGTTCTCTAACAAAAGTGAATGAAGATATAGGGGTTATTAATCATATAAGAAATCTTTTTTTCTCTACTCAAGGTCATTCGATAGACCACATTCCGAGTCAAATAGAAAGTAATTTGAAGAGCTCTTCATCTCAGCCGGGTGTCTTGAAGGAAAATTTGTTTTCAGATATTATGGCTGTGTGCTTACCTGATACCGAGAGAACTATGAGGAATGAAACAGTGGATGTTTTGAGGCCCCTTCAATGTTCTGGGAGGAACAATTCAACTCATTCTGCTTATTGGGAAATGAGTGATGATATGGTCAAGCATGAAGGATCCGAACTCTATAGTGACGTGAGTCCCATTTTGCTTCAGTCAATGTCCGATATGATTAATGTGGAGCATCAGGAAGGGTCTAGTAGTGTCTGCAAAAATATGAGATTTGAATCGGAACAAATTCTGTCATCATTTTTGAACACTTCTGCTATAAATAATGTTGGTGTTAATGATTTAATCTATCATTCAGAAAAGGCCAGAGTTGATTCTGCATGTTTTCCAACTGTTTCTATCAATGCCAATATTTGTGAAAGTGGTAAGTTGCATTATGTGGATACTCACCAAAAAGGGGTGTTGAATATTTCCAAACCTTTAAGTGCTAACTCCTATAAACATACCGAAAAGTCGGAGTTTCAAGTTGGCTCTTGCGACAAGGATACCTCGTACTTTCAAACTGAGCCGATGAAGTTTCCGGCTGGCTGTGAACTATATGAAGCACTTGGACCAGCTTCTTTGAAAGGGAGTAAATATTTTGATTTGCTAGCACAGGTTAATCAGGATATGAAAATTGTGGATATTCCAGATGCGATTAACGCTAGTCAATTGACTTCTGAATCTCTTCCAGATCATCTTTTGGAAGCAATGGTGGCCAACATTAGTCACAGTAGTAATAATGATGTCAATAGTGAATTATCCTTTTGTAGATCAATGCAATCTGCAATTAGTTCTGGAAAAACACCTGAAGCTTCTATTCACAATGTGCATACTATAGATCATCCTTCTCTTGTCAGAGAGGACAAACATCATAGTTTGAGTTCATCATCAGGGATATGTGGTGTGATGTCATCTAAAGGTGTTTCTTCTACATGTCCTAGTGCTTGTAGTGAACAACTTGAAAGGTCTTCTGAACCGTCTAAGAACAGCAAGAAGAGGGCTAGGCCCGGAGAAAGTTGCAGACCTCGTCCAAGAGACAGGCAACTGATCCAAGATCGAATTAAGGAGCTGAGAGAGCTGGTGCCAAATGGAGCAAAGTGCAGTATTGATTCACTACTGGAGCGCTCGATAAAGCACATGCTTTTTCTGCAAGGCGTAACTAAGCATGCTGACAAGCTAACTAAATTTGCTGATACTAAATCAAAGTTGCATCATATGGAAACAGATATTCTTGGATCCTCTAGTTCAGAGCAAGGTTCAAGTTGGGCAGTGGAGGTAGGGGGTCATCTGAAAGTTCATTCAATATTAGTCGAGAATCTTAGCAAGAATGGACAGATGCTTGTTGAGATGTTATGCGAGGAATGCAGCCATTTTCTTGAAATAGCAGAAGCTATAAAAAGCTTGGGCCTTACAATTTTGAAGGGTGTAACAAAAGCTCGTCGGGATGAGAAGATATGTATATGCTTTATTGTTGAGGGTGAAAACAACAGAAATGTACACAGATTGGACATCTTGTGGCCGCTTGTTCAGATACTGCAATCCAAGAGTATTGTGTATCCACAGTAA 2190 0.4032 MGWDCVVLQTVGREPPLKRRAGLRRKQAGRGILTLEDAYYDNLDYVDSSENKYCQKNLEQIAGGKFSHDALGLAVAKMSYNVYSLGEGIVGQVAVTGKHRWICADNQVTSSGLSFEFADGWQSQFSAGIRTMVVVSVIPLGVVQLGSLTKVNEDIGVINHIRNLFFSTQGHSIDHIPSQIESNLKSSSSQPGVLKENLFSDIMAVCLPDTERTMRNETVDVLRPLQCSGRNNSTHSAYWEMSDDMVKHEGSELYSDVSPILLQSMSDMINVEHQEGSSSVCKNMRFESEQILSSFLNTSAINNVGVNDLIYHSEKARVDSACFPTVSINANICESGKLHYVDTHQKGVLNISKPLSANSYKHTEKSEFQVGSCDKDTSYFQTEPMKFPAGCELYEALGPASLKGSKYFDLLAQVNQDMKIVDIPDAINASQLTSESLPDHLLEAMVANISHSSNNDVNSELSFCRSMQSAISSGKTPEASIHNVHTIDHPSLVREDKHHSLSSSSGICGVMSSKGVSSTCPSACSEQLERSSEPSKNSKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLERSIKHMLFLQGVTKHADKLTKFADTKSKLHHMETDILGSSSSEQGSSWAVEVGGHLKVHSILVENLSKNGQMLVEMLCEECSHFLEIAEAIKSLGLTILKGVTKARRDEKICICFIVEGENNRNVHRLDILWPLVQILQSKSIVYPQ 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02048 729 MobiDBLite consensus disorder prediction 532 557 - -
Trre6g02048 729 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 28 724 IPR043561 GO:0003700|GO:0006355
Trre6g02048 729 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 542 591 IPR011598 GO:0046983
Trre6g02048 729 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 25 165 IPR025610 -
Trre6g02048 729 MobiDBLite consensus disorder prediction 526 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02048 Trre-Chr6 17301891 17307097 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02048 27 724 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 38.770 1.01e-134 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02048 - - ccaj:109796613 962.985