Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02036 ATGGATGAGGGAATGTCAGGCTTTTGTATTAGAAATGGAAGTGTTCGTGGCAGTAGTGGAACAAAATGTGGTCGTTGGAATCCAACTACTGAACAAGTTAAGGTTCTGACTGAACTTTTTAGTTCAGGACTCCGTACACCAAGTACTGATCAGATTCAAAAGATCTCTAATCAGCTTAGTTTTTATGGTAAGATTGAGAGTAAGAATGTTTTTTATTGGTTTCAAAATCATAAGGCTAGGGAAAGACAAAAGCGTCGTCGTAAGGTTTCGTCTTCTGATGATGACGATGATGATAGTAGTAATAAGGATGTTATTCGTCGTGCAAATGCTATGTCGGTTCATTCTTCTACACAAAATTTTGGTCAGGTCTATAAGGTTTCAGAGCCTAAGAGGGTGATTGAGACACTTGAGCTTTTTCCCTTGAACTCATTTGGTGAATCAGAATCAAAGAATTTGAGGGTCTATGCAAATGAATGCAGAGATAATATGTTTTCATACACAATGAGGGAACAAATGGATCACCCACCATTAGATCTTTGCTTGAGTTTTATGTAA 555 0.3748 MDEGMSGFCIRNGSVRGSSGTKCGRWNPTTEQVKVLTELFSSGLRTPSTDQIQKISNQLSFYGKIESKNVFYWFQNHKARERQKRRRKVSSSDDDDDDSSNKDVIRRANAMSVHSSTQNFGQVYKVSEPKRVIETLELFPLNSFGESESKNLRVYANECRDNMFSYTMREQMDHPPLDLCLSFM 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02036 184 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 17 108 IPR044555 GO:0003700|GO:0099402
Trre6g02036 184 MobiDBLite consensus disorder prediction 86 104 - -
Trre6g02036 184 CDD homeodomain 25 85 IPR001356 GO:0003677
Trre6g02036 184 MobiDBLite consensus disorder prediction 83 113 - -
Trre6g02036 184 Pfam Homeodomain 23 83 IPR001356 GO:0003677
Trre6g02036 184 SUPERFAMILY Homeodomain-like 24 86 IPR009057 -
Trre6g02036 184 SMART HOX_1 21 88 IPR001356 GO:0003677
Trre6g02036 184 Gene3D - 22 89 - -
Trre6g02036 184 FunFam WUSCHEL-related homeobox 11 22 90 - -
Trre6g02036 184 ProSiteProfiles 'Homeobox' domain profile. 19 84 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02036 Trre-Chr6 17192496 17193328 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02036 8 184 Wox Gene Family AT3G11260 49.485 6.50e-54 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Trre6g02036 Homeodomain 2.1e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02036 - - gmx:100791433 251.906