Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02032 ATGGGAAAGCATTGTTCAAATGATTCTAACACAGTCACAATCCTCTCAAAATCCACTGTTATCCCTCACCAAAAATCAACACTTGATAATCTCAAACTCTCGATCTCAGACCTAAACATGCTCTGTTGCCATTACATTCAAAAGGGCTGTCTCTTCACAGCACCATCTCTACCCTCTGAAAAACTCATTCCTCACCTTATTAATTCTCTCTCTAAAACCCTATCAATCTTCCCCCCTCTTGCTGGCCGTTTAGTAACTGACTCCGATGGTTACATCTACATCACATGCAACGACGCCGGTGCTGATTTCATCCATGCAACCGCCACTCAATTTACCATCACCGACCTTTTATCACCACCTGATGTTCATCAAGCATTCAAACAATTCTTCCCTTTCCACCGAAAAATCAACCACACTGCTCATTTCTCACCGATTTTGGCTGTTCAAGTAACTTCCCTCGCTGACGGAATCTTCATCGGCGTCGCCGTCAGCCATGCTGTCACAGACGGTTCCACACTCTGGAATTTCTTCAATACGTTCGCCGATGTTTCCAGAGGAGTCACAGATTTCCGCCGGCTACCGGATTTCCGTCGGGAATCAATTTTGATGTCGAAAATCCCTGTCGAGTTACCGGAAGGTGAAATTAAGGTATCGTTCGACGCCGATGCGCCGTTACGGGAGAGAATTTTCAGTTTCACTCGAGAATCAATTCAGAAACTAAAAGATACAGTGAACTACCACCGTATTCCGCCGAGGGAAGATTGCGTGATTGAGATGATATCGAAGTTCAGAAACGATCCAACGGTTATGTTTCCGGTAACCGTCGAAACGACAGAGATTTCGTCGTTTCAGTCACTCTGCGCGCTGATGTGGCGATGCGTGACACGAGCTAGGAAACTTGAGGGTTCTAAAACGACGACGTTTAGAATGGCTGTGAATATTCGTAGCCGTTTGGAGCCAAAGTTACCGCAGTATTATTTTGGGAATGCGATTCAAAGCATTGCCACGTATGCAGCTGCTGGTGACGTGGTTGATAATGATCTTACGTGGTGTGCGGAGCAGCTGAATAAGAGTGTGAAGGAGTATGATAATGCTACGGTGAGGCGTGTCGCAGGAAATTGGGACCTTGAGCCGAAGTGTTTTCCAATGGGGAATCATGATGGTGGGACATTGCAGATGGGTAGTTCTCATAGGTTTCCGATGTATGAGAATGATTTTGGATGGGGGCGGCCGTTGGCGGTGAGGAGCGGTGGAGCTAATAAGTTTGACGGGAAGATGTCAGCATTTCCGGGGAGGAAAGGTGGTGGCGCTGTTGATTTGGAGGTGGTTTTATCGCCTGAAACAATGGCACGACTTGAGATTGATTCGGAGTTTATGCTTTACGCTTCTTGTCAGCACTCACACGTGTATTAA 1413 0.4657 MGKHCSNDSNTVTILSKSTVIPHQKSTLDNLKLSISDLNMLCCHYIQKGCLFTAPSLPSEKLIPHLINSLSKTLSIFPPLAGRLVTDSDGYIYITCNDAGADFIHATATQFTITDLLSPPDVHQAFKQFFPFHRKINHTAHFSPILAVQVTSLADGIFIGVAVSHAVTDGSTLWNFFNTFADVSRGVTDFRRLPDFRRESILMSKIPVELPEGEIKVSFDADAPLRERIFSFTRESIQKLKDTVNYHRIPPREDCVIEMISKFRNDPTVMFPVTVETTEISSFQSLCALMWRCVTRARKLEGSKTTTFRMAVNIRSRLEPKLPQYYFGNAIQSIATYAAAGDVVDNDLTWCAEQLNKSVKEYDNATVRRVAGNWDLEPKCFPMGNHDGGTLQMGSSHRFPMYENDFGWGRPLAVRSGGANKFDGKMSAFPGRKGGGAVDLEVVLSPETMARLEIDSEFMLYASCQHSHVY 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02032 470 Gene3D - 212 454 IPR023213 -
Trre6g02032 470 Gene3D - 9 208 IPR023213 -
Trre6g02032 470 Pfam Transferase family 11 459 - -
Trre6g02032 470 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 14 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02032 Trre-Chr6 17175124 17176536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02032 12 453 Monolignol Biosynthesis Gene Families AT5G48930 27.991 5.99e-41 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02032 - - cam:101506439 711.064