Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02026 ATGGCAAAGAAGCGGCAACCAACCACCACCGCCGCGGCCAAAGATGACCAACCACTCACCCCCGCCTCAAAGAACGACCAACCACCACCGTCCAAAAAGCCGGAAGAAGAAAAAGTAGAAGAAAAAGAGGACGAAGAGGTAACATCGGAAGAAGCTTCATCATCTGAAGGCGAAGAAGATGATGATGATGATGATGAAGAAGAACAAACACCTTCTTCCAAAATCGTTCCACCTGCAAAATCCGAATCGAAAAAAGATGAAGTCAACGAAGACGAAGAAGAAACCGATACTGATTCTGATTCTGATCAAGAACCACCTCCCAAACTCAAATCCATCAATTTAAAATCGATCGATGAAACCCTAAAATCAAAGCCTCAACCAAAATCCTCCGCCGCACCGGCCAGATCTGGAACCAAACGTTCTGCCGACGACGACACCAAACAATCAAAGAAGAAGAAAACAATCGCCGCTGCTGACGATGAGAAAGTGAAGGAGGTGGATAACAAGAAGTCCGGTGACGATTCGAAAAAATTGTTTGTGAGAGTTTTCAACGAAGATGATGAACTCGCAATTCTCAAAGGTTTTTTGGATTTCACTGAGAAAACAGGGACGGATCCGCTCAAATATCCCACAGCTTTTTACCAGGATGTGAAAACTTCAATTCATTTTCCGGTTACACTCGATCAACTGAAAGATAAGGTTCGGAGGCTGAAGTTGAAATTCGAGAATAAGATGAAAAGTTGTAAGAATGGAAAGACTCCTACTTTTTCCAAACCTATTGAGGAGGAAATGTTTGAATTTAGCAAAAAGATTTGGGGTGGTACAATTGTTGAAGAAAATGGAAAACATAATGAGAAACCCTCTAAGAAGAAACTTGCTGTTAAGAAATCACCAACAACGAAGAAATTGGTGATGGAACCTGATTTGCCTTTGGTGGTTCGGAAGGAAACTAGTAAGGTGGGAAGTAGTAGTGATGGAAAGGAGAATCCTGGATTGAGTTTGATTTTGAACGAAATGGAACAATTTAACCGGAGTGTATCAAGTGTTTTTGGGTCGGGTGCGGATTTGCTTAAGAGCGGAGTGGAGTTGATTGAGGAATCAAAGAGGATTGATAATGGATGCGTTGAAGCCATCATCAGGCGATTAGGTAGATATGCTTGTATGTGCCTCAACATTTGA 1179 0.4215 MAKKRQPTTTAAAKDDQPLTPASKNDQPPPSKKPEEEKVEEKEDEEVTSEEASSSEGEEDDDDDDEEEQTPSSKIVPPAKSESKKDEVNEDEEETDTDSDSDQEPPPKLKSINLKSIDETLKSKPQPKSSAAPARSGTKRSADDDTKQSKKKKTIAAADDEKVKEVDNKKSGDDSKKLFVRVFNEDDELAILKGFLDFTEKTGTDPLKYPTAFYQDVKTSIHFPVTLDQLKDKVRRLKLKFENKMKSCKNGKTPTFSKPIEEEMFEFSKKIWGGTIVEENGKHNEKPSKKKLAVKKSPTTKKLVMEPDLPLVVRKETSKVGSSSDGKENPGLSLILNEMEQFNRSVSSVFGSGADLLKSGVELIEESKRIDNGCVEAIIRRLGRYACMCLNI 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02026 392 MobiDBLite consensus disorder prediction 40 69 - -
Trre6g02026 392 MobiDBLite consensus disorder prediction 116 136 - -
Trre6g02026 392 Pfam Protein of unknown function, DUF573 179 273 IPR007592 GO:0006355
Trre6g02026 392 MobiDBLite consensus disorder prediction 1 172 - -
Trre6g02026 392 MobiDBLite consensus disorder prediction 138 172 - -
Trre6g02026 392 Coils Coil 227 247 - -
Trre6g02026 392 PANTHER BNAANNG10740D PROTEIN-RELATED 47 369 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02026 Trre-Chr6 17134909 17136612 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g02026 110 304 GeBP Transcription Factor Family AT4G25210 39.234 5.92e-22 94.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Trre6g02026 DUF573 1.8e-28 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02026 - - tpra:123884521 426.402