Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g02025 ATGAGGAAAGTAGTACATTGGACAAATGACGAACACATGCGTTTCTTGAAGGGTCTTTTACATGGCTATAAGGGAAATTGGAAAGATATCTCCCAAAAATACGTAGTGACAAAGACTCCAACCCAAGTGGCAAGCCATGCTCAAAAGTATTATAAAAGGCAAGAGCAAAAATTTGATGATAAGAGCAAAGATATTAAAAGGAAACCTAGAACAAGCATCCATGATACGACGACTATTGATTTTATTATGGGTATCTCATATACCCCATCTAATAATCAGGTGATTCAAGTCAACAATGATGCGACTTTTAACAAAGAATATGACCGAGAGCAAGTGATTCAAGTCAATAATGATAATAACGCATCATCCTCATCCGAATTTCACAACATAGAATGGGATCTAAACGATATCGTTATTACCGAGGAAGATTTGTCCATTATATTTGACATGCCTAATGAAGATGGATCACTCGCATCCGCGACTTTCAACAAAGAATGTGACCAAGAGCAAGTGATTCAAGTCAATAATGATAATAATGCATCATCCTCATCCGAAATTCACGACATAGAATGGGATCTAGACGATATCGTTTCCGAGGAAGATTTGTCCACTATAAATGACATGTTGAATGAAGATGGATCACTCGCATCCGCAACTTTCAACAAATGA 669 0.3707 MRKVVHWTNDEHMRFLKGLLHGYKGNWKDISQKYVVTKTPTQVASHAQKYYKRQEQKFDDKSKDIKRKPRTSIHDTTTIDFIMGISYTPSNNQVIQVNNDATFNKEYDREQVIQVNNDNNASSSSEFHNIEWDLNDIVITEEDLSIIFDMPNEDGSLASATFNKECDQEQVIQVNNDNNASSSSEIHDIEWDLDDIVSEEDLSTINDMLNEDGSLASATFNK 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g02025 222 ProSiteProfiles SANT domain profile. 1 55 IPR017884 -
Trre6g02025 222 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 55 IPR017930 -
Trre6g02025 222 NCBIfam myb-like DNA-binding domain, SHAQKYF class 4 54 IPR006447 GO:0003677
Trre6g02025 222 PANTHER TRANSCRIPTION FACTOR KUA1 2 163 - -
Trre6g02025 222 Pfam Myb-like DNA-binding domain 6 50 IPR001005 -
Trre6g02025 222 Gene3D - 5 56 - -
Trre6g02025 222 SUPERFAMILY Homeodomain-like 3 56 IPR009057 -
Trre6g02025 222 SMART sant 3 53 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g02025 Trre-Chr6 17121201 17122053 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Trre6g02025 Myb_DNA-binding 2.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g02025 - - mtr:11423031 124.02