Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01914 ATGTTGATGGGTTGCTGCTGCTTTAGTGCAAAGGTCAAAGCTGAGAGTCCTGCACATAATGGTTTGAATTCAAAGGTTGGTGGGAGAGAAGAGGATGTTTCGAGCGGTTTAAGCAGAAAGGCATCTTCTTCACATCTGCTTCTAACTTGTAGGACCGAGGGTGAGATACTGCAATCCATCAATTTGAAGTGTTTTACAATCAATGAGATAAGAACCGCGACAAGGAACTTTCGTCCAGATAGTATGGTCGGCGAAGGTGGATTTGGTTCCGTATTTAAGGGTTGGATCGATGAACATACGCTAGCCCCTACTAAACCAGGTACTGGTTTTGTCATTGCTGTCAAGAGGCTTAACCAAGAAAGCAGTCAAGGACATAGTGAATGGTTGACAGAAATCAATTACCTTGGACAGCTTCGTCATCCTAATCTTGTGAAATTGGTTGGTTACTGCTTAGAGGATGATTACCGGATTTTGGTATATGAATTCGTGACAAAAGGAAGTTTGGATAATCATTTGTTTAGAAGAGCTTCTTACTTTCAGCCACTCTCTTGGAAAATCCGAATGAAGATAGCTCTTGATTCTGCTAAGGGACTTGCATTTCTTCACAGTGATGAAGTCGAAGTGATATATCGAGACTTCAAAACTTCTAATATCTTGATTGATTCTGACTATAATGCAAAACTCTCTGATTTCGGGATGGCGAAAGATGGACCAGAAGTTGGTAAGAGCCATGTGTCTACAAGGGTAATGGGCACCCCAGGTTATGCAGCACCTGAGTATCTAGCCACAGGTCACCTAACCAAAAAGAGTGATGTATACAGTTTTGGAGTCGTTCTTTTAGAAATTATGTCGGGAAAACGTGTATTGGACAAAAACAGGCCAACTAAGGAACATAATTTAGTTGAATGGGCAAAACCATTACTTATCAGTAAACGCAAAATCTTTCAAGTCATGGATGCTCGTATAGAAGGTCAATACTCGTCGCGTGAAGCAATGAAAGTAGCTCAGATTGCAATTCAATGTATGTCGGTAGAACAAAAATATCGACCAAACATTGATGAGGTGGTGAGATCATTGGAACAACTTCAGGATTCCAATGACAAAACAAACGGTATTAGTTCAAGTAGCAGTGGTTTAGATCAACGCGGAAATACTGTCGATGGATCTTTAACCGGAGAAGGTAGTTCTAATATCAGTTCATCTGCTTCTCCTCTTCATAATTAG 1224 0.4069 MLMGCCCFSAKVKAESPAHNGLNSKVGGREEDVSSGLSRKASSSHLLLTCRTEGEILQSINLKCFTINEIRTATRNFRPDSMVGEGGFGSVFKGWIDEHTLAPTKPGTGFVIAVKRLNQESSQGHSEWLTEINYLGQLRHPNLVKLVGYCLEDDYRILVYEFVTKGSLDNHLFRRASYFQPLSWKIRMKIALDSAKGLAFLHSDEVEVIYRDFKTSNILIDSDYNAKLSDFGMAKDGPEVGKSHVSTRVMGTPGYAAPEYLATGHLTKKSDVYSFGVVLLEIMSGKRVLDKNRPTKEHNLVEWAKPLLISKRKIFQVMDARIEGQYSSREAMKVAQIAIQCMSVEQKYRPNIDEVVRSLEQLQDSNDKTNGISSSSSGLDQRGNTVDGSLTGEGSSNISSSASPLHN 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01914 407 FunFam Serine/threonine-protein kinase PBS1 163 377 - -
Trre6g01914 407 Pfam Protein tyrosine and serine/threonine kinase 81 359 IPR001245 GO:0004672|GO:0006468
Trre6g01914 407 MobiDBLite consensus disorder prediction 363 407 - -
Trre6g01914 407 MobiDBLite consensus disorder prediction 18 37 - -
Trre6g01914 407 PANTHER OS01G0588500 PROTEIN-RELATED 43 363 - -
Trre6g01914 407 CDD STKc_IRAK 83 362 - -
Trre6g01914 407 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Trre6g01914 407 ProSiteProfiles Protein kinase domain profile. 77 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g01914 407 FunFam Serine/threonine-protein kinase BIK1 44 162 - -
Trre6g01914 407 SUPERFAMILY Protein kinase-like (PK-like) 52 359 IPR011009 -
Trre6g01914 407 Gene3D Transferase(Phosphotransferase) domain 1 163 381 - -
Trre6g01914 407 ProSitePatterns Protein kinases ATP-binding region signature. 83 115 IPR017441 GO:0005524
Trre6g01914 407 Gene3D Phosphorylase Kinase; domain 1 52 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01914 Trre-Chr6 16002693 16005215 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01914 55 359 Glycoside Hydrolase AT3G07070 45.425 1.29e-94 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Trre6g01914 PK_Tyr_Ser-Thr 3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01914 - - gmx:100800735 591.267