Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01912 ATGAACTATCATCCAAATGAACTAGTTGGTGAAGGTGAATCTGGTTCGGTATATAAGGGGTGGTTATGGATCGTTGAACACACAGCCCCTGCCAAACGAGGTACTGGTTTTTTCGTTGCTTTGAAAAAGATTTACAGACAAAGAAGAGACGAAAAATGGTTGACAGAAATGTATTACATGGAACAGCTGCATCATCCTAATCTTGTAAAATTGATTGGTTACTGTTTAGACGAGGATCATTTCCAGCAATATGTGGTATATGAGTTTTTGGCCAAGGGGAGTTTGGATAATCATTTGTTTAAAACAGCAACTTCTTCTAACTTTGAGCCACTCACTTGGCAAACCCGAATGAAGATAGCTCTTGATGTTGCTGAGGGTCTTGCATTTCTTCATAGTAATCAAGCGGAAATGATAATTGGAGACTTCAAAATTTCTAAAATCTTGATTGATTCTAACTACAATGCAAAACTAAATTATTTTGGGTGGGCAAACTATTTACTAAATGAAGATTCGATCGACCCAGATATGGTATGTATACAACGACGCACCCATATTTACACAGCACCTGAGTATGAACAGACAGCTCATCCATCCAAAAAGAGTGATGTATACAGTTTTGGGGTTATTCTCCTTGAAATCATTTCAGGAAAACGTGCATCAGATTACATCAGGTCACCACCATTGGAACGTAATTTATTTCGGTGGGCCAAATCATTCCATATCAACAAACGCGACATCCATCAATTAATGGATTCGCATATAGAAGGCCAATACTCACCGCGTGAAGCAATGGAAGTAGCTAATATTGTAATTCAATGTCTTTCTGCAAGACCAACACATAGACCAAACATTGATGAGGTTGTGAGGTCATTGGAACAACTTCAAAACAAACGGTTATATATAGAGCAGCGGTGGTTTAGAACAATATGGAAAAAAGTCATGAATCAGTGGAGAAGGCTTTGTTTGGATTGA 972 0.3817 MNYHPNELVGEGESGSVYKGWLWIVEHTAPAKRGTGFFVALKKIYRQRRDEKWLTEMYYMEQLHHPNLVKLIGYCLDEDHFQQYVVYEFLAKGSLDNHLFKTATSSNFEPLTWQTRMKIALDVAEGLAFLHSNQAEMIIGDFKISKILIDSNYNAKLNYFGWANYLLNEDSIDPDMVCIQRRTHIYTAPEYEQTAHPSKKSDVYSFGVILLEIISGKRASDYIRSPPLERNLFRWAKSFHINKRDIHQLMDSHIEGQYSPREAMEVANIVIQCLSARPTHRPNIDEVVRSLEQLQNKRLYIEQRWFRTIWKKVMNQWRRLCLD 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01912 323 SUPERFAMILY Protein kinase-like (PK-like) 2 308 IPR011009 -
Trre6g01912 323 ProSiteProfiles Protein kinase domain profile. 3 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g01912 323 PANTHER OS01G0588500 PROTEIN-RELATED 2 295 - -
Trre6g01912 323 Pfam Protein tyrosine and serine/threonine kinase 7 291 IPR001245 GO:0004672|GO:0006468
Trre6g01912 323 ProSitePatterns Protein kinases ATP-binding region signature. 9 42 IPR017441 GO:0005524
Trre6g01912 323 Gene3D Phosphorylase Kinase; domain 1 3 93 - -
Trre6g01912 323 Gene3D Transferase(Phosphotransferase) domain 1 94 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01912 Trre-Chr6 15985788 15987263 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01912 2 291 Glycoside Hydrolase AT3G07070 36.913 2.46e-52 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Trre6g01912 PK_Tyr_Ser-Thr 2.8e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01912 - - gmx:100775335 305.834