Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01911 ATGACTGAGGGTAAGATATTATCCAACAATTTGAAGTGTTACACATTCGATCAGTTAAATTTTGCTACAATGAACTATCATCCAAATGAACTAGTTGGTGAAGGTGAATCTGGTTCGGTATATAAGGGGTGGTTATGGATCGTTGAACACACAGCCCCTGCCAAACGAGGTACTGGTTTTTTCGTTGCTTTGAAAAAGATTTACAGACAAAGAAGAGACGAAAAATGGTTGACAGAAATGTATTACATGGAACAGCTGCATCATCCTAATCTTGTAAAATTGATTGGTTACTGTTTAGACGAGGATCATTTCCAGCAATATGTGGTATATGAGTTTTTGGCCAAGGGGAGTTTGGATAATCATTTGTTTAAAACAGCAACTTCTTCTAACTTTGAGCCACTCACTTGGCAAACCCGAATGAAGATAGCTCTTGATGTTGCTGAGGGTCTTGCATTTCTTCATAGTAATCAAGCGGAAATGATAATTGGAGACTTCAAAATTTCTAAAATCTTGATTGATTCTAACTACAATGCAAAACTAAATTATTTTGGGTGGGCAAACTATTTACTAAATGAAGATTCGATCGACCCAGATATGGTATGTATACAACGACGCACCCATATTTACACAGCACCTGAGTATGAACAGACAGCTCATCCATCCAAAAAGAGTGATGTATACAGTTTTGGGGTTATTCTCCTTGAAATCATTTCAGGAAAACGTGCATCAGATTACATCAGGTCACCACCATTGGAACGTAATTTATTTCGGTGGGCCAAATCATTCCATATCAACAAACGCGACATCCATCAATTAATGGATTCGCATATAGAAGGCCAATACTCACCGCGTGAAGCAATGGAAGTAGCTAATATTGTAATTCAATGTCTTTCTGCAAGACCAACACATAGACCAAACATTGATGAGGTTGTGAGGTCATTGGAACAACTTCAAAACAAACGGTTATATATAGAGCAGCGGTGGTTTAGAACAATATGGAAAAAAGTCATGAATCAGTGGAGAAGGTACTTCTAA 1035 0.3768 MTEGKILSNNLKCYTFDQLNFATMNYHPNELVGEGESGSVYKGWLWIVEHTAPAKRGTGFFVALKKIYRQRRDEKWLTEMYYMEQLHHPNLVKLIGYCLDEDHFQQYVVYEFLAKGSLDNHLFKTATSSNFEPLTWQTRMKIALDVAEGLAFLHSNQAEMIIGDFKISKILIDSNYNAKLNYFGWANYLLNEDSIDPDMVCIQRRTHIYTAPEYEQTAHPSKKSDVYSFGVILLEIISGKRASDYIRSPPLERNLFRWAKSFHINKRDIHQLMDSHIEGQYSPREAMEVANIVIQCLSARPTHRPNIDEVVRSLEQLQNKRLYIEQRWFRTIWKKVMNQWRRYF 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01911 344 Gene3D Transferase(Phosphotransferase) domain 1 113 332 - -
Trre6g01911 344 SUPERFAMILY Protein kinase-like (PK-like) 11 331 IPR011009 -
Trre6g01911 344 Pfam Protein tyrosine and serine/threonine kinase 30 314 IPR001245 GO:0004672|GO:0006468
Trre6g01911 344 ProSitePatterns Protein kinases ATP-binding region signature. 32 65 IPR017441 GO:0005524
Trre6g01911 344 ProSiteProfiles Protein kinase domain profile. 26 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g01911 344 Gene3D Phosphorylase Kinase; domain 1 2 112 - -
Trre6g01911 344 PANTHER OS01G0588500 PROTEIN-RELATED 6 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01911 Trre-Chr6 15985719 15987112 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01911 6 321 Receptor kinase-like Gene Family AT3G58690 36.364 3.26e-58 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Trre6g01911 PK_Tyr_Ser-Thr 3.5e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01911 - - gmx:100775335 325.479