Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01885 ATGTCCACCACCGTCAGAATTCAAGTTTCGGCATGCGCTCTTTCCGCCACCGTCAACAACCTCCGTTACCGCTCAAACTACGCCGTATCAACCAGCAGCTTCAAGAACAACCGGCTCAGCATCAAACCCCTCAGAGTATCAATGTCTTCTGTTCCTCCTTCTGAGCCTTTCGAAGTTGCTGTCAAAGCTTCTCTCACCACACCCAACAAGCTTGGAGACTGCCCTTTTACTCAAAGGGTATTGCTGACATTGGAGGAAAAACATTTACCTTATGAGCAGAAATTGGTGGATTTAAGGAACAAACCAGAATGGTTCCTTGAAATCAGTCCTGAAGGTAAAGTTCCTGTAATAAAATTTGATGGGAAATGGGTTGCCGATTCAGATGTAATCACACAAATATTGGAAGAGAAGTATCCCAGCCCTCCATTGGTGACTCCACCTGAAAAGGCTACAGTTGGATCGAAGATATTTTCTACATTTATTGGATTTCTCAAGAGCAAAGATCCCAATGATGGAACGGAACAAGCATTATTGGATGAACTAAGCTCCTTCAATGATTACCTCAAGGAAAATGGTCCTTTTATCAATGGCAAAGATATATCTGCAGCTGACTTATCACTTGGACCAAAGCTATACCATTTGGAGATTGCTTTAGGGCATTTTAAGAAATGGAAAATACCCGATTCACTGACCTTTTTGAAGTCTTACTTGAAGGATATTTTCTCAAGGGAATCATTCATCAACACACGTGCACAGCCGGAAGATGTCATTGAAGGTTGGCGCCCTAAAGTGGAGGGTTGA 801 0.4282 MSTTVRIQVSACALSATVNNLRYRSNYAVSTSSFKNNRLSIKPLRVSMSSVPPSEPFEVAVKASLTTPNKLGDCPFTQRVLLTLEEKHLPYEQKLVDLRNKPEWFLEISPEGKVPVIKFDGKWVADSDVITQILEEKYPSPPLVTPPEKATVGSKIFSTFIGFLKSKDPNDGTEQALLDELSSFNDYLKENGPFINGKDISAADLSLGPKLYHLEIALGHFKKWKIPDSLTFLKSYLKDIFSRESFINTRAQPEDVIEGWRPKVEG 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01885 266 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 64 142 IPR004045 -
Trre6g01885 266 FunFam Glutathione S-transferase DHAR3 chloroplastic 55 143 - -
Trre6g01885 266 Gene3D - 144 266 - -
Trre6g01885 266 SUPERFAMILY Thioredoxin-like 73 140 IPR036249 -
Trre6g01885 266 FunFam Glutathione S-transferase DHAR3, chloroplastic 144 266 - -
Trre6g01885 266 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 56 263 IPR044627 GO:0033355|GO:0045174|GO:0098869
Trre6g01885 266 Gene3D Glutaredoxin 56 143 - -
Trre6g01885 266 SFLD Glutathione Transferase (cytosolic) 73 240 IPR040079 -
Trre6g01885 266 CDD GST_N_family 74 135 - -
Trre6g01885 266 Pfam Glutathione S-transferase, N-terminal domain 73 142 IPR004045 -
Trre6g01885 266 CDD GST_C_DHAR 143 263 - -
Trre6g01885 266 SUPERFAMILY GST C-terminal domain-like 137 263 IPR036282 -
Trre6g01885 266 SFLD Main (cytGST) 73 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01885 Trre-Chr6 15692319 15696112 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01885 28 266 Glutathione S-transferase Gene Family AT5G16710 70.539 5.55e-128 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01885 K21888 - gmx:732557 431.409