Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01856 ATGGAATCTGACCGTCAATCGGAGAATGATTTTGATATTGAGGATCGGACTGATGAAGAACAAAGTAATGGTTCATTTGACAATGATGAATACAATAGCAGTGGAGATGAAGTAGGAGGTGGAATTGATGAAGAACTGAGTGATAACGAAGATGGCAACGAGCTTGTTGGGGAAGTTGACTTGTCGTCGACTGACAATAGTGAACAAGAGGAATCTGATGCAGAGCAGATAAACATTAATTGCATGGCGGATATTATGAAGATTGATATGAACAACATATTGGTAGACGAAGTGGAAAGGTACTGTTTCGCTACTCTGGATATTGCTTACAAGTTCTACTACTGGTATGGAAGAACAACTGGGTTTTCCGTGCGCAAGAGTCGTGTTGTGAGGAATGTTGCTGGTGAAGTTGTTCAGCAAACGTTTTTATGTTCTCGCGAAGGATATAGAGAATGTAATGGTTTAACATGGGAGAAACGGACGCGTGTGCCCAAATTTGAAACTAGGTGTGGATGTGGAGCCAAATTTAGAGTGCACATAGATATTCTTACCAGGTGTTGGTATGTCACGTTATTTGAATTTGAGCATAATCATGAACTGTTCGATGGTACTATGTGTGGTCTATTACCAGGACATAGAAAGATGACGGAGGCGGATGTTCAGGATATTGAGAGTCATGAAAATGTTGGGATAAGACCATATCAGATGTATGGGGCAATGGCTAATTCGGCGGGGGGTTTCCACAAGGTAGGCTATTACTACTAG 765 0.4144 MESDRQSENDFDIEDRTDEEQSNGSFDNDEYNSSGDEVGGGIDEELSDNEDGNELVGEVDLSSTDNSEQEESDAEQININCMADIMKIDMNNILVDEVERYCFATLDIAYKFYYWYGRTTGFSVRKSRVVRNVAGEVVQQTFLCSREGYRECNGLTWEKRTRVPKFETRCGCGAKFRVHIDILTRCWYVTLFEFEHNHELFDGTMCGLLPGHRKMTEADVQDIESHENVGIRPYQMYGAMANSAGGFHKVGYYY 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01856 254 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 9 248 - -
Trre6g01856 254 MobiDBLite consensus disorder prediction 1 23 - -
Trre6g01856 254 Pfam FAR1 DNA-binding domain 111 201 IPR004330 -
Trre6g01856 254 MobiDBLite consensus disorder prediction 1 73 - -
Trre6g01856 254 MobiDBLite consensus disorder prediction 41 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01856 Trre-Chr6 15524354 15525670 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre6g01856 FAR1 1.8e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01856 - - tpra:123884554 232.261