Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01829 ATGGAGGAACATAAACATGTGATGACAACATGTGAAGAAGATCAACACATGGTTGCTGCAGCTCAACACATTCTAAAAGCACTAGCTTCAAGCAAAACTATTTCTCATGAGATGAGAAAAACTCTCTTGGATCTTGAGATTCAATTGTCTACAATCAATGAAAGAAAGGGAAGTGGAATCAAGCAATTAGAGAGAAAGCTTAAATATCTTGAAGATAAGGCTGTGATGTTAAGGCTTGAGGAAGAGTTGGTTCAAATTCTTGTTAATCATAAGCAATATTTTGAGGTTGATTATATGTCTTCCAATTCCAATAGAGTGGATTTGGTTTATGATGAATCATTTGGTTCGGTTGAGGATGAACGAATCAACAAGGTGTCGCGGAGTATTGATGATAGTCTATCCGAGGCGAGCAATATAGATTTGGTGAATCCATCTGTACTTGAAGATCTCAAAAGCATTGCTAAAGCCATGTTTGGTTCAAATTACCAACATGAGTTTTGTCATGTTTTCATTTCTTCTAGGAGAGATGCCTTGGATGAGTACTTTGTCATTCTAGAACTCGAAAAATTAAGCATCGAAAATATGCTAAAAATGGAGTGGCAAGGTTTGAGTCGAATGATAAAGAAATGGATTCGAGCGATGAAGTTCATTGTTCAGGCGTATCTTGTTGGCGAGAAACGATTGTGTAAGCAGATTCTCGGTAACTTTGGATCGGCTTATCAGCTTTGCTTCTCCGAAATATCTCGGAGTTCGGTTTTGCACCTTTTAAATTTTGGTGAGGCCATAGCAATGGGAACACATTCACCAGAGAAACTGTTCTGTTTACTTGACATGTATGAGGCATTAGAACATGTTGCAGTGGATATAGATTTTTTGTTCATTGAAGAAACAGATTCTTTTATTAGAAGAGAGTTTCATAAGCTTCAAAGAATCATTGTCGAAACTATAAAATCCACATTTCTTTCATTTAGAAATGCTATTGCAACAGATCCATCAAAAACATGTTTTCCTTGTGGAGGTGTTCACCCTCTTACAAAATATGTCATGAATTACATAAATTTACTTGTTGAATATGGTAATAGCCTTAATCTTCTTGTCGATGAATGTTCAACCGATCCAACGGATAGCAACAATGAAAGTTCGACCGATCCATTGGCTTGCAACTTAAGGCTAATCACTACAACATTAGAATCAAACTTGTGTAACAAATCCAAGTTATACAATGATGTGGCTTTGCAACATATTTTCATGATGAATAATATTCATTACATGGTGCAAAAGGTTAAGTCTACTCAACTAAGTAATTTCTTCGGAGATTGCTGGCTTCGTCGACATGTTGGCATGTTTCAAAATTATGCTCGAAGCTACGAGAAGGTGAGTTGGTGTTCAGTACTTTCTTTTCTTAGCGACGAAAGTTTGTCTAGTAGTGCCGCGGAGAGAAAAATAAAGAAAAAATGCAAAGATTTTAGTGCTGCTTTTGGTGAAGTATACAAAACACAAACAGGATGGAGTGTACCGGATAAAGAACTTTGCGAAGATTTACAGATATCCGTTTCTCAGAAAGTGATTCCTGCTTATCGAAGTTTTACCGGTAGACACTCGTCTAAAATTGATGAGAAGTGGATCAAGTACACAGTAGATGATCTACAATGCTATATTTTGGATCTTTTTCAAGGTTCATCATCAAAATCTTTGCACCATTTTCAGCATAGAAAGTGA 1719 0.3647 MEEHKHVMTTCEEDQHMVAAAQHILKALASSKTISHEMRKTLLDLEIQLSTINERKGSGIKQLERKLKYLEDKAVMLRLEEELVQILVNHKQYFEVDYMSSNSNRVDLVYDESFGSVEDERINKVSRSIDDSLSEASNIDLVNPSVLEDLKSIAKAMFGSNYQHEFCHVFISSRRDALDEYFVILELEKLSIENMLKMEWQGLSRMIKKWIRAMKFIVQAYLVGEKRLCKQILGNFGSAYQLCFSEISRSSVLHLLNFGEAIAMGTHSPEKLFCLLDMYEALEHVAVDIDFLFIEETDSFIRREFHKLQRIIVETIKSTFLSFRNAIATDPSKTCFPCGGVHPLTKYVMNYINLLVEYGNSLNLLVDECSTDPTDSNNESSTDPLACNLRLITTTLESNLCNKSKLYNDVALQHIFMMNNIHYMVQKVKSTQLSNFFGDCWLRRHVGMFQNYARSYEKVSWCSVLSFLSDESLSSSAAERKIKKKCKDFSAAFGEVYKTQTGWSVPDKELCEDLQISVSQKVIPAYRSFTGRHSSKIDEKWIKYTVDDLQCYILDLFQGSSSKSLHHFQHRK 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01829 572 Pfam Exo70 exocyst complex subunit 208 554 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trre6g01829 572 SUPERFAMILY Cullin repeat-like 67 557 IPR016159 -
Trre6g01829 572 PANTHER EXOCYST COMPLEX PROTEIN EXO70 73 559 IPR004140 GO:0000145|GO:0006887
Trre6g01829 572 Coils Coil 60 80 - -
Trre6g01829 572 Gene3D Exocyst complex component Exo70 53 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01829 Trre-Chr6 15221199 15223067 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01829 75 558 EXO70 exocyst subunit family AT5G61010 46.232 1.62e-149 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01829 K07195 - gmx:100803510 690.263