Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01822 ATGGCAGTTCAAAGCTCCACTTCCAATAAACAACAACCTCCCAACAACGTTTCTCACGACCATTTCTTTGTATGGAGGGAGTTTGTATGGGGAGCTGTTGCGGGCGCTTTTGGGGAAGGAATGATGCATCCGGTAGATACCATCAAAACTCGAATACAAAGTCAAGCCATTCTAAATGGTGTTAAGAACCAGAAAGGCATATTGCAGATGGTGCGGTCTGTCTGGAAGGTTGACGGATTAAGAGGCTTTTACAGGGGTGTAATGCCTGGTGTTACTGGGTCTCTGGCGACTGGTGCAACATATTTTGGCGTCATAGAGTCCACTAAAACGTGGATTGAGGATTCACATCCTAGCCTTGGTGGCCATTGGGCACATTTCATTGCTGGAGCTGTTGGAGATACACTTGGTTCTGTGGTATATGTTCCATGCGAAGTGATAAAGCAGCGCATGCAAGTTCAGGGCACAATTACATCCTGGAGTTCTACTACAATGAAGAATGGCATTGCAATAAAACCTGGTGCAGAAATATATGACTATTATAAAGGAATGTTCCATGCAGGCTGCTCGATATGGAGAACACAGGGCTTCAAGGGTTTATATGCAGGATATTTGTCTACACTGGCAAGGGATGTTCCATTTGCTGGCCTGATGGTTGTGTTCTATGAAGCTTTGAAAGATGTCACAGAGTATGGGAAGCAAAGATGGGTATCTAACCCAAAATGGCATGTTAATAATTCATTTGAGGGACTGGTTTTAGGAGGATTAGCTGGTGGTCTCAGTGCATATCTTACCACTCCTTTGGATGTCGTCAAAACTAGGCTGCAAGTTCAGGGTTCAACTTTTAGGTATAATGGTTGGTTGGATGCAATGTGCAATATATGGGCTAAGGAAGGCATGAAGGGGATGTTTAGGGGTAGCATTCCCAGAATTGCGTGGTACATTCCTGCTTCAGCGCTTACATTCATGGCTGTGGAATTTCTCCGAGAAAATTTTAATGAAAGAGCACCTAATGGTGATTCGAGAGATGTTGCCAGATTATCAGTTGAAAAGAAGAAATCTCTGCAGGAGGCTACTTAA 1077 0.4392 MAVQSSTSNKQQPPNNVSHDHFFVWREFVWGAVAGAFGEGMMHPVDTIKTRIQSQAILNGVKNQKGILQMVRSVWKVDGLRGFYRGVMPGVTGSLATGATYFGVIESTKTWIEDSHPSLGGHWAHFIAGAVGDTLGSVVYVPCEVIKQRMQVQGTITSWSSTTMKNGIAIKPGAEIYDYYKGMFHAGCSIWRTQGFKGLYAGYLSTLARDVPFAGLMVVFYEALKDVTEYGKQRWVSNPKWHVNNSFEGLVLGGLAGGLSAYLTTPLDVVKTRLQVQGSTFRYNGWLDAMCNIWAKEGMKGMFRGSIPRIAWYIPASALTFMAVEFLRENFNERAPNGDSRDVARLSVEKKKSLQEAT 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01822 358 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 8 336 - -
Trre6g01822 358 FunFam Mitochondrial substrate carrier family protein 6 166 - -
Trre6g01822 358 SUPERFAMILY Mitochondrial carrier 21 327 IPR023395 -
Trre6g01822 358 FunFam Mitochondrial substrate carrier family protein 168 347 - -
Trre6g01822 358 Gene3D Mitochondrial carrier domain 167 348 IPR023395 -
Trre6g01822 358 Gene3D Mitochondrial carrier domain 2 166 IPR023395 -
Trre6g01822 358 ProSiteProfiles Solute carrier (Solcar) repeat profile. 120 227 IPR018108 -
Trre6g01822 358 ProSiteProfiles Solute carrier (Solcar) repeat profile. 22 111 IPR018108 -
Trre6g01822 358 ProSiteProfiles Solute carrier (Solcar) repeat profile. 244 330 IPR018108 -
Trre6g01822 358 Pfam Mitochondrial carrier protein 246 333 IPR018108 -
Trre6g01822 358 Pfam Mitochondrial carrier protein 122 227 IPR018108 -
Trre6g01822 358 Pfam Mitochondrial carrier protein 23 114 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01822 Trre-Chr6 15142970 15147607 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01822 123 337 Chloroplast and Mitochondria Gene Families AT1G07030 24.186 1.15e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01822 - - gmx:100790921 590.112