Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01770 ATGGCGCTGTTCCGAAGATTCTTTTACCGGAAACCGCCGGATCGTCTTCTTGAGATCTCCGAGAGAGTCTACGTTTTTGATTGCTGCTTCTCTACGGACGTCTTGGAAGAGGATGAGTACAAAGTGTATATGGGGGGCATTGTAGCTCAGCTACAAGATTACTATCCAGATGCTTCTTTCATGGTATTCAATTTCAGAGAAGGGGATAGGCGCAGCCAAATTGCAGACCTTTTATCTCTGTGTGACATGACAGTTATGGAGTACCCTCGGGAATACGAGGGCTGTCCACTTCTGCCTTTAGAGATGATTCATCACTTCCTTCGATCAAGTGAAAGCTGGCTGTCTTTGGAGGGGCAACAAAATGTGCTTTTGATGCACTGTGAAAGAGGGGGATGGCCCGTGCTGGCGTTTATGCTAGCCGGTCTTTTATTGTACCGAAAACAATACAGTGGGGAGCTGAAAACTCTTGAAATGGTCTACAAGCAAGCACCTAGAGAACTTCTCCAGCTTTTATTACCTTTGAACCCACAACCTTCTCAGTTAAGATATCTTCAGTATATTTCCAGGAGACATTTGGGTTCTGAGTGGCCTCCATCAGAAACACCCTTATATTTGGATTGTTTGATTCTAAGAGTTCTTCCACAATTTGATGATGGAAAAGGTTGCAGGCCTGTTGTACGTGTTTATGGTCCGGACCCTTCAAATCCTGCCAATAGGAGTTCTAAGCTTCTTTTCTCAACTTCAAAAAATCAAACACACGTGCGCCACTACTTGCAGGCAGAATGTATGCTCGTGAAAATTGATATTCGTTGTCGTGTTCAAGGGGATGTCGTTCTTGAGTGCATACATTTAAGCGAAGATTTCATTCGTGAGGAGATGATGTTTAGAGTCATGTTTCATACAGCGTTTGTACGGTCAAATATTTTGGTGCTGAGCCGCGATGAAATGGATATGTTGTGGGATACAAAGGATCAGTTCTCCAAGGATTTTAAATCTGAGGTGGTTTTTTTGGATGCTGATGCTGTTATACCTGATCTAACCACAGTCAATGTGAGTGGAGATGAAAATGAAACAGAAAGCGGTTCACCTGAGGAATTCTATGAAGTTGAAGAGATCTTCAGCAATGCAATTGATGCACAGGATTCTCCAAGGGTTCGTGACAGTGCGGTAGAAGATGGAAGCCATAAAGATATCTGGAATGAGTATTCAGATCCTCATACTTTTCAGGATTCTAGACCAGATGATGGGATTCACCAGCAGGTTGGAACGACGGATTCTGGTATTAATGAAGTGAAAGACATTACTGTTGATGATGTGAATTACAAGCTTGATGAGCGTGTAGATTCAGATACTCATGTAGTGAAAGATATTGCTGTGGATGATGGGTACAATAAGCCAAGTTCCATTGCAGTCGCTTTTGATATGATGGAAACTCCGGAGAGACAGGAAGTCACTTTAGATGCACATGAGGAGTTGGCAGTTATACAAAACAATTATGATGAAGATAACAACACACCACTAAAAGAATTAGAGCCTGAGGAAGGGAAACAGATGCATGATCTTCCCAGATCAATGTCTGTTGAAAATAACAAAGATTCCTATCAAGATTCATTGCATGTTTCATACCCACTGACAAGGCATAATAGTTTACCAAATGCTCTGTTAAATGCCGCCGGTGCAAAGGAGAAAATGACTAATGCTGAAGAAAGACTTATTTCTAGTCCTCATGTCAACGAATCGGCTGATTCTATGGACATGACAAATGATCTGAAAAGTTGTAATAGGAACAATTCAAAATCTTTAGAAAGCATAGGGGAAACAGACTCAAACGCCCAACTATCATCAATAATGCCAATTACAGAGTCATCTCATCAGACAACTACTCAAACACCACAGTTGAGCACTGATCAAGTGCTACCGCCTCATCCTCCCCCACCACCCCCACCTCCACGCAAATTACCATCTTCTTCCTTGGATGGTGAAGTGTCTACAATACCGCAACCGCCGCCACAACCGCCACCACCACCACCTACTTTGACACTATTTGGTAAGAAAAATAAAGAGATGGACTTACAAGCTGCAACTCCTCCTCCTCCACCGCCACCTCCCCCTCCATTTTCTGGGCAAAATAGAGGGAGCTCATTACCTCTTTCTAGTCATTGGCAGCCAGTTTATTCATCCATTGGTGAAGTTGGAGAAAATAGTGGTGTTCCTCCTCCACCACCACCACCACCACCACCACCTCCATCTCCTCCCACAAAATATGGAGTTACGTCCGTTCCTCCTCCACCACCTCCCCTGCCTCCTTTGTTTTATATGGATAGAGCTCCACTCCTTCCTCCCTCAACACCAACATCACTTCACACTCCATCCCCGCCACCTTTATGTAAATCTTCACCTCCACTACCACCACCACCACCTCCTCCTCCTCCTCCTCCTCCTCCTCCCCCGCCTGTTGTATATAGAGCTTTACCATCAGCACCTTCATCTTCTTTTACTAGAGCCCCACCACCACCTCCTCCACCGCCACCTTCTTTATGTATAGCTCCATCATCTCCACCTTATATTGGTATAGATACATCGCCTCCACCTCTTCCTCCATCAAGTGAACAACCTCCACCGCCACCACCACCACCACCACCACCACCATCTCCTTCAATGTCTAAGGCCCCACCACCCCCACCTCCACCATTCTATGGAGCTCTACCATCACCGCCACCACCTCCTTCAATGTCTAAAGTCCCACCACCCCCACCACCACCACCACCACCACATCTTGCACCAAATGGAGCACCTCCATCACCACCCCCACCTCCTTCAATGTCTCAGGCTCCACCACCTCCACCTCCACCACCACCACCTCCTTCAATGTCTCAGGCTCCACCACCTCCACCTCCACCTCCACCTCCTTCGATGTCTAAGGCCCCACCATCTCCACCATCACCACCACCACCACCACCAAATCTTCCTCCATCAAGCGAAGCACCTCCTTCAATGTCCAAGGCTCCACCACCCCCACCTCCACCACCTCCTTCAATGTCTAAGTCTCCACCACCCCCACCTCCACCATTTTATGGATCTCCATCATCACTACCAACTAATCTTCCTGAATCAAGTGAAGCACCTCAACCACCTCCTTCAGCGTCTAAGGCCCCACCACCCCCACCTCCACCACCACCATCATATCTTCTTGCATCAAATGGAGCACCTCCACCACCACCACCACCACCACCTCCTTCAATGTCTAATCCCCCACCACCCCCACCTCCACCACCACAATCATATCTTCTTGCATCAAATGAAGCACCGCCACCACCTCCTTCAATGTCTTATCCCCCACCACCCCCACCTCCACCATTCTATGGAGCTCCACCACCACCCTCACCTCCTTCAATGTCTAAGGCCCCACCACCCCCACCTCCACCATTCTATGGAGCTCCACCACCACCACCACCACATCCTTCAATGTCTAATGCCCCACCACCCCCACCTCCACCATTCTATGGAGCTCCACCACCACCATCTCCAATGAATGGAGCACGAGCGCCACCTCCTCCACCTCCTCCGGGTGGTGGAGGCCCACCTCCTCCTCCACCTCCAGGTTTTCAAGGCCCACCTCCTCCGCCACTTCCAGGTGGTGGAGGCCCACCTCCTCCGCCACCTCCAGGTAGTCGAGGCCCAGCTCCACCACCTCCTCCTGGAGTTGGAGTGCCTGGCGCTCCTGCACCTCCTAGACTTCCGGGTGGTGCACCTCCACCACCTGGAGGTCCGGGAGGAGGGAGAGGGCGTGGACTTGCACGTCCTACAGGTGCTGGTGCTCCTCGAAAATCCTCCTTAAAGCCTCTTCATTGGAGTAAGGTAACAAGGGCATTGAAAGGAAGTTTATGGGAAGAATTACAAAGACATGGAGAAACTCAAAGTGGACAGGAGTTTGACGTTTCAGAGTTAGAGAAGCTTTTTGCTCTAAATGTTCCAAAACCAGCTGGTAAACCTGGAGGGAGCAAACCAGTAGCACCCAAAAATGACAAAATCACCTTGGTTGACCTAAAGAGAGCCAATAATACTGAAATTATGCTCACAAAGGTTAAGATGCCACTTCCTGATATGATGGCTGCAGTACTTGCTTTGGATGACTCGGTATTAGATGTTGATCAGGTGGAAAATCTTGTTAAATTTTGTCCTACCAAAGACGAAATGGATCTTTTGAAGGGATATACTGGTGACAAGGAAAATTTGGGAAAGTGTGAACAGTTCCTTTTGGAGCTGATGAAAGTGCCACGAGTGGAGTCGAAATTAAGAGTATTCTGTTTCAAGATTCAATTTCAGTCTCAGATTACAGAGTTTAATAAGAGTTTAAACTTAGTGAACTCTGCATGTGACGAGGTCCGAAATTCACTCAAACTGAAGGAGATTATGAAGAAAATTCTTTATTTGGGTAATACATTGAATCAAGGAACAGCAAGGGGATCTGCTGTTGGATTCAAGTTGGATAGCCTTTTAAAGCTCACTGACACTCGTGCTTCTAACAGTAAAATGACACTGATGCATTATCTTTGCAAGGTCCTAGCTGAAAAGAATCCTGCACTCCTTGATTTTCACCATGACCTAGGTAGCGTAGAGACTGCCTCTAAGATTCAATTGAAAGCATTAGCAGAAGAAATGCAGGCAATTACCAAGGGACTAGAAAAAGTAAACCAGGAGCTTGCTGCATCTGAAAATGATGGCCCAGTGTCTGAAGTTTTCCGTAAGACATTGAAAGGTTTCATTAATGAAGCCAAGTCTCAGGTGGATTCTGTAACACGCCTATATTCTGATGTGGGTAGAAATGCAGATGCACTTGCACAATATTTCGGTGAGGATCCTGCCCGTTGTCCATTTGAGCAAGTTACTGCAACTCTCTTAAATTTTATGAAGTTGTTTCTCAAAGCACATGAAGAGAATATCAAACAAGCAGAATTAGAGAAGAAGAAAGCTGAGAAAGAGGCTGAAATGGAGAAGAAAGCTGAGAAAGAGGCTGGAACGGAGAAGCGTAAAGGCAGTAACTTGACAAGAAAGAGTGGAAAAGATAAAGAAGAAGGAAGCTGA 5085 0.4669 MALFRRFFYRKPPDRLLEISERVYVFDCCFSTDVLEEDEYKVYMGGIVAQLQDYYPDASFMVFNFREGDRRSQIADLLSLCDMTVMEYPREYEGCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGELKTLEMVYKQAPRELLQLLLPLNPQPSQLRYLQYISRRHLGSEWPPSETPLYLDCLILRVLPQFDDGKGCRPVVRVYGPDPSNPANRSSKLLFSTSKNQTHVRHYLQAECMLVKIDIRCRVQGDVVLECIHLSEDFIREEMMFRVMFHTAFVRSNILVLSRDEMDMLWDTKDQFSKDFKSEVVFLDADAVIPDLTTVNVSGDENETESGSPEEFYEVEEIFSNAIDAQDSPRVRDSAVEDGSHKDIWNEYSDPHTFQDSRPDDGIHQQVGTTDSGINEVKDITVDDVNYKLDERVDSDTHVVKDIAVDDGYNKPSSIAVAFDMMETPERQEVTLDAHEELAVIQNNYDEDNNTPLKELEPEEGKQMHDLPRSMSVENNKDSYQDSLHVSYPLTRHNSLPNALLNAAGAKEKMTNAEERLISSPHVNESADSMDMTNDLKSCNRNNSKSLESIGETDSNAQLSSIMPITESSHQTTTQTPQLSTDQVLPPHPPPPPPPPRKLPSSSLDGEVSTIPQPPPQPPPPPPTLTLFGKKNKEMDLQAATPPPPPPPPPPFSGQNRGSSLPLSSHWQPVYSSIGEVGENSGVPPPPPPPPPPPPSPPTKYGVTSVPPPPPPLPPLFYMDRAPLLPPSTPTSLHTPSPPPLCKSSPPLPPPPPPPPPPPPPPPPVVYRALPSAPSSSFTRAPPPPPPPPPSLCIAPSSPPYIGIDTSPPPLPPSSEQPPPPPPPPPPPPSPSMSKAPPPPPPPFYGALPSPPPPPSMSKVPPPPPPPPPPHLAPNGAPPSPPPPPSMSQAPPPPPPPPPPPSMSQAPPPPPPPPPPSMSKAPPSPPSPPPPPPNLPPSSEAPPSMSKAPPPPPPPPPSMSKSPPPPPPPFYGSPSSLPTNLPESSEAPQPPPSASKAPPPPPPPPPSYLLASNGAPPPPPPPPPPSMSNPPPPPPPPPQSYLLASNEAPPPPPSMSYPPPPPPPPFYGAPPPPSPPSMSKAPPPPPPPFYGAPPPPPPHPSMSNAPPPPPPPFYGAPPPPSPMNGARAPPPPPPPGGGGPPPPPPPGFQGPPPPPLPGGGGPPPPPPPGSRGPAPPPPPGVGVPGAPAPPRLPGGAPPPPGGPGGGRGRGLARPTGAGAPRKSSLKPLHWSKVTRALKGSLWEELQRHGETQSGQEFDVSELEKLFALNVPKPAGKPGGSKPVAPKNDKITLVDLKRANNTEIMLTKVKMPLPDMMAAVLALDDSVLDVDQVENLVKFCPTKDEMDLLKGYTGDKENLGKCEQFLLELMKVPRVESKLRVFCFKIQFQSQITEFNKSLNLVNSACDEVRNSLKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLTDTRASNSKMTLMHYLCKVLAEKNPALLDFHHDLGSVETASKIQLKALAEEMQAITKGLEKVNQELAASENDGPVSEVFRKTLKGFINEAKSQVDSVTRLYSDVGRNADALAQYFGEDPARCPFEQVTATLLNFMKLFLKAHEENIKQAELEKKKAEKEAEMEKKAEKEAGTEKRKGSNLTRKSGKDKEEGS 1694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01770 1694 Gene3D - 206 336 - -
Trre6g01770 1694 Coils Coil 1634 1673 - -
Trre6g01770 1694 Pfam C2 domain of PTEN tumour-suppressor protein 199 336 IPR014020 -
Trre6g01770 1694 SMART PTEN_C2_2 198 1378 IPR014020 -
Trre6g01770 1694 MobiDBLite consensus disorder prediction 665 680 - -
Trre6g01770 1694 MobiDBLite consensus disorder prediction 504 519 - -
Trre6g01770 1694 SMART it6_source 640 1694 IPR015425 -
Trre6g01770 1694 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 188 IPR029021 -
Trre6g01770 1694 MobiDBLite consensus disorder prediction 500 519 - -
Trre6g01770 1694 Pfam Formin Homology 2 Domain 1274 1640 IPR015425 -
Trre6g01770 1694 MobiDBLite consensus disorder prediction 1038 1258 - -
Trre6g01770 1694 Gene3D Formin, FH2 domain 1288 1680 IPR042201 -
Trre6g01770 1694 MobiDBLite consensus disorder prediction 637 654 - -
Trre6g01770 1694 Gene3D Protein tyrosine phosphatase superfamily 14 205 IPR029021 -
Trre6g01770 1694 MobiDBLite consensus disorder prediction 693 709 - -
Trre6g01770 1694 MobiDBLite consensus disorder prediction 710 729 - -
Trre6g01770 1694 Coils Coil 1547 1574 - -
Trre6g01770 1694 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1217 1660 - -
Trre6g01770 1694 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1269 1666 IPR015425 -
Trre6g01770 1694 MobiDBLite consensus disorder prediction 573 1285 - -
Trre6g01770 1694 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 336 IPR035892 -
Trre6g01770 1694 MobiDBLite consensus disorder prediction 573 636 - -
Trre6g01770 1694 MobiDBLite consensus disorder prediction 783 823 - -
Trre6g01770 1694 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Trre6g01770 1694 MobiDBLite consensus disorder prediction 735 775 - -
Trre6g01770 1694 MobiDBLite consensus disorder prediction 1654 1694 - -
Trre6g01770 1694 PANTHER FORMIN-J 1183 1671 - -
Trre6g01770 1694 MobiDBLite consensus disorder prediction 831 1029 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01770 Trre-Chr6 14528964 14542667 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01770 1 554 FH2 protein (formin) Gene Family AT5G07740 59.696 0.0 707
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01770 - - tpra:123913936 1318.52