Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01769 ATGGCGCTGTTCCGAAGATTCTTTTACCGGAAACCGCCGGATCGTCTTCTTGAGATCTCCGAGAGAGTCTACGTTTTTGATTGCTGCTTCTCTACGGACGTCTTGGAAGAGGATGAGTACAAAGTGTATATGGGGGGCATTGTAGCTCAGCTACAAGATTACTATCCAGATGCTTCTTTCATGGTATTCAATTTCAGAGAAGGGGATAGGCGCAGCCAAATTGCAGACCTTTTATCTCTGTGTGACATGACAGTTATGGAGTACCCTCGGGAATACGAGGGCTGTCCACTTCTGCCTTTAGAGATGATTCATCACTTCCTTCGATCAAGTGAAAGCTGGCTGTCTTTGGAGGGGCAACAAAATGTGCTTTTGATGCACTGTGAAAGAGGGGGATGGCCCGTGCTGGCGTTTATGCTAGCCGGTCTTTTATTGTACCGAAAACAATACAGTGGGGAGCTGAAAACTCTTGAAATGGTCTACAAGCAAGCACCTAGAGAACTTCTCCAGCTTTTATTACCTTTGAACCCACAACCTTCTCAGTTAAGATATCTTCAGTATATTTCCAGGAGACATTTGGGTTCTGAGTGGCCTCCATCAGAAACACCCTTATATTTGGATTGTTTGATTCTAAGAGTTCTTCCACAATTTGATGATGGAAAAGGTTGCAGGCCTGTTGTACGTGTTTATGGTCCGGACCCTTCAAATCCTGCCAATAGGAGTTCTAAGCTTCTTTTCTCAACTTCAAAAAATCAAACACACGTGCGCCACTACTTGCAGGCAGAATGTATGCTCGTGAAAATTGATATTCGTTGTCGTGTTCAAGGGGATGTCGTTCTTGAGTGCATACATTTAAGCGAAGATTTCATTCGTGAGGAGATGATGTTTAGAGTCATGTTTCATACAGCGTTTGTACGGTCAAATATTTTGGTGCTGAGCCGCGATGAAATGGATATGTTGTGGGATACAAAGGATCAGTTCTCCAAGGATTTTAAATCTGAGGTGGTTTTTTTGGATGCTGATGCTGTTATACCTGATCTAACCACAGTCAATGTGAGTGGAGATGAAAATGAAACAGAAAGCGGTTCACCTGAGGAATTCTATGAAGTTGAAGAGATCTTCAGCAATGCAATTGATGCACAGGATTCTCCAAGGGTTCGTGACAGTGCGGTAGAAGATGGAAGCCATAAAGATATCTGGAATGAGTATTCAGATCCTCATACTTTTCAGGATTCTAGACCAGATGATGGGATTCACCAGCAGGTTGGAACGACGGATTCTGGTATTAATGAAGTGAAAGACATTACTGTTGATGATGTGAATTACAAGCTTGATGAGCGTGTAGATTCAGATACTCATGTAGTGAAAGATATTGCTGTGGATGATGGGTACAATAAGCCAAGTTCCATTGCAGTCGCTTTTGATATGATGGAAACTCCGGAGAGACAGGAAGTCACTTTAGATGCACATGAGGAGTTGGCAGTTATACAAAACAATTATGATGAAGATAACAACACACCACTAAAAGAATTAGAGCCTGAGGAAGGGAAACAGATGCATGATCTTCCCAGATCAATGTCTGTTGAAAATAACAAAGATTCCTATCAAGATTCATTGCATGTTTCATACCCACTGACAAGGCATAATAGTTTACCAAATGCTCTGTTAAATGCCGCCGGTGCAAAGGAGAAAATGACTAATGCTGAAGAAAGACTTATTTCTAGTCCTCATGTCAACGAATCGGCTGATTCTATGGACATGACAAATGATCTGAAAAGTTGTAATAGGAACAATTCAAAATCTTTAGAAAGCATAGGGGAAACAGACTCAAACGCCCAACTATCATCAATAATGCCAATTACAGAGTCATCTCATCAGACAACTACTCAAACACCACAGTTGAGCACTGATCAAGTGCTACCGCCTCATCCTCCCCCACCACCCCCACCTCCACGCAAATTACCATCTTCTTCCTTGGATGGTGAAGTGTCTACAATACCGCAACCGCCGCCACAACCGCCACCACCACCACCTACTTTGACACTATTTGGTAAGAAAAATAAAGAGATGGACTTACAAGCTGCAACTCCTCCTCCTCCACCGCCACCTCCCCCTCCATTTTCTGGGCAAAATAGAGGGAGCTCATTACCTCTTTCTAGTCATTGGCAGCCAGTTTATTCATCCATTGGTGAAGTTGGAGAAAATAGTGGTGTTCCTCCTCCACCACCACCACCACCACCACCACCTCCATCTCCTCCCACAAAATATGGAGTTACGTCCGTTCCTCCTCCACCACCTCCCCTGCCTCCTTTGTTTTATATGGATAGAGCTCCACTCCTTCCTCCCTCAACACCAACATCACTTCACACTCCATCCCCGCCACCTTTATGTAAATCTTCACCTCCACTACCACCACCACCACCTCCTCCTCCTCCTCCTCCTCCTCCTCCCCCGCCTGTTGTATATAGAGCTTTACCATCAGCACCTTCATCTTCTTTTACTAGAGCCCCACCACCACCTCCTCCACCGCCACCTTCTTTATGTATAGCTCCATCATCTCCACCTTATATTGGTATAGATACATCGCCTCCACCTCTTCCTCCATCAAGTGAACAACCTCCACCGCCACCACCACCACCACCACCACCACCATCTCCTTCAATGTCTAAGGCCCCACCACCCCCACCTCCACCATTCTATGGAGCTCTACCATCACCGCCACCACCTCCTTCAATGTCTAAAGTCCCACCACCCCCACCACCACCACCACCACCACATCTTGCACCAAATGGAGCACCTCCATCACCACCCCCACCTCCTTCAATGTCTCAGGCTCCACCACCTCCACCTCCACCACCACCACCTCCTTCAATGTCTCAGGCTCCACCACCTCCACCTCCACCTCCACCTCCTTCGATGTCTAAGGCCCCACCATCTCCACCATCACCACCACCACCACCACCAAATCTTCCTCCATCAAGCGAAGCACCTCCTTCAATGTCCAAGGCTCCACCACCCCCACCTCCACCACCTCCTTCAATGTCTAAGTCTCCACCACCCCCACCTCCACCATTTTATGGATCTCCATCATCACTACCAACTAATCTTCCTGAATCAAGTGAAGCACCTCAACCACCTCCTTCAGCGTCTAAGGCCCCACCACCCCCACCTCCACCACCACCATCATATCTTCTTGCATCAAATGGAGCACCTCCACCACCACCACCACCACCACCTCCTTCAATGTCTAATCCCCCACCACCCCCACCTCCACCACCACAATCATATCTTCTTGCATCAAATGAAGCACCGCCACCACCTCCTTCAATGTCTTATCCCCCACCACCCCCACCTCCACCATTCTATGGAGCTCCACCACCACCCTCACCTCCTTCAATGTCTAAGGCCCCACCACCCCCACCTCCACCATTCTATGGAGCTCCACCACCACCACCACCACATCCTTCAATGTCTAATGCCCCACCACCCCCACCTCCACCATTCTATGGAGCTCCACCACCACCATCTCCAATGAATGGAGCACGAGCGCCACCTCCTCCACCTCCTCCGGGTGGTGGAGGCCCACCTCCTCCTCCACCTCCAGGTTTTCAAGGCCCACCTCCTCCGCCACTTCCAGGTGTTGGAGTGCCTGGCGCTCCTGCACCTCCTAGACTTCCGGGTGGTGCACCTCCACCACCTGGAGGTCCGGGAGGAGGGAGAGGGCGTGGACTTGCACGTCCTACAGGTGCTGGTGCTCCTCGAAAATCCTCCTTAAAGCCTCTTCATTGGAGTAAGGTAACAAGGGCATTGAAAGGAAGTTTATGGGAAGAATTACAAAGACATGGAGAAACTCAAAGTGGACAGGAGTTTGACGTTTCAGAGTTAGAGAAGCTTTTTGCTCTAAATGTTCCAAAACCAGCTGGTAAACCTGGAGGGAGCAAACCAGTAGCACCCAAAAATGACAAAATCACCTTGGTTGACCTAAAGAGAGCCAATAATACTGAAATTATGCTCACAAAGGTTAAGATGCCACTTCCTGATATGATGGCTGCAGTACTTGCTTTGGATGACTCGGTATTAGATGTTGATCAGGTGGAAAATCTTGTTAAATTTTGTCCTACCAAAGACGAAATGGATCTTTTGAAGGGATATACTGGTGACAAGGAAAATTTGGGAAAGTGTGAACAGTTCCTTTTGGAGCTGATGAAAGTGCCACGAGTGGAGTCGAAATTAAGAGTATTCTGTTTCAAGATTCAATTTCAGTCTCAGATTACAGAGTTTAATAAGAGTTTAAACTTAGTGAACTCTGCATGTGACGAGGTCCGAAATTCACTCAAACTGAAGGAGATTATGAAGAAAATTCTTTATTTGGGTAATACATTGAATCAAGGAACAGCAAGGGGATCTGCTGTTGGATTCAAGTTGGATAGCCTTTTAAAGCTCACTGACACTCGTGCTTCTAACAGTAAAATGACACTGATGCATTATCTTTGCAAGGTCCTAGCTGAAAAGAATCCTGCACTCCTTGATTTTCACCATGACCTAGGTAGCGTAGAGACTGCCTCTAAGATTCAATTGAAAGCATTAGCAGAAGAAATGCAGGCAATTACCAAGGGACTAGAAAAAGTAAACCAGGAGCTTGCTGCATCTGAAAATGATGGCCCAGTGTCTGAAGTTTTCCGTAAGACATTGAAAGGTTTCATTAATGAAGCCAAGTCTCAGGTGGATTCTGTAACACGCCTATATTCTGATGTGGGTAGAAATGCAGATGCACTTGCACAATATTTCGGTGAGGATCCTGCCCGTTGTCCATTTGAGCAAGTTACTGCAACTCTCTTAAATTTTATGAAGTTGTTTCTCAAAGCACATGAAGAGAATATCAAACAAGCAGAATTAGAGAAGAAGAAAGCTGAGAAAGAGGCTGAAATGGAGAAGAAAGCTGAGAAAGAGGCTGGAACGGAGAAGCGTAAAGGCAGTAACTTGACAAGAAAGAGTGGAAAAGATAAAGAAGAAGGAAGCTGA 5019 0.4638 MALFRRFFYRKPPDRLLEISERVYVFDCCFSTDVLEEDEYKVYMGGIVAQLQDYYPDASFMVFNFREGDRRSQIADLLSLCDMTVMEYPREYEGCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGELKTLEMVYKQAPRELLQLLLPLNPQPSQLRYLQYISRRHLGSEWPPSETPLYLDCLILRVLPQFDDGKGCRPVVRVYGPDPSNPANRSSKLLFSTSKNQTHVRHYLQAECMLVKIDIRCRVQGDVVLECIHLSEDFIREEMMFRVMFHTAFVRSNILVLSRDEMDMLWDTKDQFSKDFKSEVVFLDADAVIPDLTTVNVSGDENETESGSPEEFYEVEEIFSNAIDAQDSPRVRDSAVEDGSHKDIWNEYSDPHTFQDSRPDDGIHQQVGTTDSGINEVKDITVDDVNYKLDERVDSDTHVVKDIAVDDGYNKPSSIAVAFDMMETPERQEVTLDAHEELAVIQNNYDEDNNTPLKELEPEEGKQMHDLPRSMSVENNKDSYQDSLHVSYPLTRHNSLPNALLNAAGAKEKMTNAEERLISSPHVNESADSMDMTNDLKSCNRNNSKSLESIGETDSNAQLSSIMPITESSHQTTTQTPQLSTDQVLPPHPPPPPPPPRKLPSSSLDGEVSTIPQPPPQPPPPPPTLTLFGKKNKEMDLQAATPPPPPPPPPPFSGQNRGSSLPLSSHWQPVYSSIGEVGENSGVPPPPPPPPPPPPSPPTKYGVTSVPPPPPPLPPLFYMDRAPLLPPSTPTSLHTPSPPPLCKSSPPLPPPPPPPPPPPPPPPPVVYRALPSAPSSSFTRAPPPPPPPPPSLCIAPSSPPYIGIDTSPPPLPPSSEQPPPPPPPPPPPPSPSMSKAPPPPPPPFYGALPSPPPPPSMSKVPPPPPPPPPPHLAPNGAPPSPPPPPSMSQAPPPPPPPPPPPSMSQAPPPPPPPPPPSMSKAPPSPPSPPPPPPNLPPSSEAPPSMSKAPPPPPPPPPSMSKSPPPPPPPFYGSPSSLPTNLPESSEAPQPPPSASKAPPPPPPPPPSYLLASNGAPPPPPPPPPPSMSNPPPPPPPPPQSYLLASNEAPPPPPSMSYPPPPPPPPFYGAPPPPSPPSMSKAPPPPPPPFYGAPPPPPPHPSMSNAPPPPPPPFYGAPPPPSPMNGARAPPPPPPPGGGGPPPPPPPGFQGPPPPPLPGVGVPGAPAPPRLPGGAPPPPGGPGGGRGRGLARPTGAGAPRKSSLKPLHWSKVTRALKGSLWEELQRHGETQSGQEFDVSELEKLFALNVPKPAGKPGGSKPVAPKNDKITLVDLKRANNTEIMLTKVKMPLPDMMAAVLALDDSVLDVDQVENLVKFCPTKDEMDLLKGYTGDKENLGKCEQFLLELMKVPRVESKLRVFCFKIQFQSQITEFNKSLNLVNSACDEVRNSLKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLTDTRASNSKMTLMHYLCKVLAEKNPALLDFHHDLGSVETASKIQLKALAEEMQAITKGLEKVNQELAASENDGPVSEVFRKTLKGFINEAKSQVDSVTRLYSDVGRNADALAQYFGEDPARCPFEQVTATLLNFMKLFLKAHEENIKQAELEKKKAEKEAEMEKKAEKEAGTEKRKGSNLTRKSGKDKEEGS 1672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01769 1672 MobiDBLite consensus disorder prediction 1038 1236 - -
Trre6g01769 1672 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 188 IPR029021 -
Trre6g01769 1672 Pfam C2 domain of PTEN tumour-suppressor protein 199 336 IPR014020 -
Trre6g01769 1672 MobiDBLite consensus disorder prediction 1632 1672 - -
Trre6g01769 1672 MobiDBLite consensus disorder prediction 573 1263 - -
Trre6g01769 1672 SMART it6_source 640 1672 IPR015425 -
Trre6g01769 1672 MobiDBLite consensus disorder prediction 665 680 - -
Trre6g01769 1672 MobiDBLite consensus disorder prediction 504 519 - -
Trre6g01769 1672 Gene3D Formin, FH2 domain 1266 1658 IPR042201 -
Trre6g01769 1672 PANTHER FORMIN-J 1159 1649 - -
Trre6g01769 1672 Gene3D Protein tyrosine phosphatase superfamily 14 205 IPR029021 -
Trre6g01769 1672 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 336 IPR035892 -
Trre6g01769 1672 Gene3D - 206 336 - -
Trre6g01769 1672 MobiDBLite consensus disorder prediction 500 519 - -
Trre6g01769 1672 Coils Coil 1612 1651 - -
Trre6g01769 1672 MobiDBLite consensus disorder prediction 637 654 - -
Trre6g01769 1672 MobiDBLite consensus disorder prediction 693 709 - -
Trre6g01769 1672 MobiDBLite consensus disorder prediction 710 729 - -
Trre6g01769 1672 SMART PTEN_C2_2 198 1356 IPR014020 -
Trre6g01769 1672 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1247 1644 IPR015425 -
Trre6g01769 1672 MobiDBLite consensus disorder prediction 573 636 - -
Trre6g01769 1672 Coils Coil 1525 1552 - -
Trre6g01769 1672 MobiDBLite consensus disorder prediction 783 823 - -
Trre6g01769 1672 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Trre6g01769 1672 Pfam Formin Homology 2 Domain 1252 1618 IPR015425 -
Trre6g01769 1672 MobiDBLite consensus disorder prediction 735 775 - -
Trre6g01769 1672 MobiDBLite consensus disorder prediction 831 1029 - -
Trre6g01769 1672 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1320 1647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01769 Trre-Chr6 14528964 14542667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01769 1 554 FH2 protein (formin) Gene Family AT5G07740 59.696 0.0 707
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01769 - - tpra:123913936 1318.52