Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01762 ATGAAGATGAAGAAGATTCATTTCAGCAAGATCTATTCATTTAAATTTGGTAAAAAAACAAAGTTTAGAAAAGAGCATTCACAGATTGGAAGACAAGGGTATTCTAGAGTTGTTTTATGTAATGAATTACAAGATAGTTTTGAATCAGATTTGATTAGGAATTATGCTGATAATTCTGTTAGGTCAACTAAATATACTGTTGCTACTTTTTTCCCAAAGTCATTGTTTGAGCAGTTTAGGAGGGTAGCTAATTTCTATTTCCTTGTTGCTGGTATCTTAGCTTTCACAAAACTTGCTCCTTATACCGCCGTTAGTGCTATTCTTCCTTTATGTATTATCGTTGGAGCAACTATGGTGAAAGAAGGTATTGAAGATTTGCGTCGGAAAAAACAGGATATTGAGGTGAACAATAGAAAAGTTATATTTCATAAAGGTGATGGCAATTTTGAATATACGGAGTGGAAGAATCTCAGGGTAGGAAATATAGTGAAGATAAAGAAGGATGAATTCTTCCCTGCCGACCTCCTACTGCTTTCGTCCAGTTACGAAGATGCAGTCTGCTATGTTGAAACCATGAATTTGGATGGTGAGACAAATTTGAAGCTAAAGCAAGGTTTGGAAGTAACTTCTTCGTTAAATGAGGAAGTTAAACTCCATGATTTCAAAGCTACCATCAAATGTGAAGATCCAAATGCAAATTTGTACTCATTTGTCGGAAGCATGGAATTTGAAGGGCAAAAATATCCACTTTCTCCTCAGCAGCTTCTTCTCAGAGACTCAAAACTTCGTAATACAGATTACGTATTCGGAGCAGTCATCTTTACCGGCCACGACACAAAGGTTATTCAAAATACTACTGACCCTCCTTCGAAAAGAAGCAAAATCGAGAAGAAGATGGATAAGATTATCTACTTCTTATTTGGTGTTTTGTTTTTAATTGCTTTCGTTGGATCTATTCTCTTTGGAATCGTAACTAAACGTGACTTACACAATGGATTTATGAAAAGATGGTATCTGAGACCAGATGATTCCACCATTTTCTTTGATCCTAAAAGAGTTGCCGCAGCTTCTGTATATCATTTCTTGACAGCTTTAATGCTATATAACTTCTTCATTCCCATCTCCTTGTATTTCTCGATTGAATTGGTCAAAATCCTTCAAAGCATCTTCATTAATCAAGATATCAATATGTACTATGAAGAACTGGACAAACCAGCTCTTGCACGTACTTCAAACTTGAATGAAGAACTCGGCCAAATCGACACGATCCTTTCTGATAAAACTGGAACTTTGACTTGCAACTCGATGGAGTTCATCAAATGTTCTGTTGCCGGGGTAGCTTATGGCCGTGTTGTTACAGAGGTTGAACAAGCCATTGGCAGTATAAGTAATAGTTCACCTATGATTCATGAACATGTTAATAGGTTGGAACCGATTACAGTTGATACCAAAGAAGCTCATGATCGAAAAGAACCGATCAAAGGTTTCAACTTTATAGATGAAAGGATAATGAACGGAAACTGGGTTAATGAGCCTCATGCAGATGTTATACAGAAGTTTTTCCGATTATTGGCCGTTTGTCATACTGCCATACCAGAAGTGAATGACGACACCGGAAGAGTTACGTATGAAGCTGAATCTCCCGATGAAGCAGCATTTGTGATTGCTGCAAGAGAAGTTGGTTTCACATTCTACAAAAGGAGTCAGAATAGTTTATCAATGAAAGAGTTGGATCCTGTTTCTGGCAATGAAGTTGAAAGGACATACAAGATTCTTCATGTTTTAGAATTCAATAGTTCAAGGAAGCGAATGTCGGTGATAATTAAAGATGAAGAAGGGAGAATTTTACTACTCTGCAAAGGCGCTGACAGTGTCATGTTTGAAAGGCTTGCGCTGAATGGGAGAGATTTTGAGGAGAAAACTTTGGAACATGTGGGCGAATATGCTGATGCAGGTCTAAGAACCCTGATACTAGCCTATCGTGAACTTGATGAAGAAGAATATAATGAGTTTGACGATAAATTTACGGAAGTCAGAAATTCGGTCACCGTAGATCGTGAATCGCTGATTGAAGAACTATCAGATAAGATTGAGAGGAATCTAGTCCTTCTTGGTGCCACTGCTGTTGAAGACAAGCTCCAAGATGGGGTTCCTGATTGTATTGAAAAGCTTGCGCAAGCTAGAATTAAGATATGGGTTTTGACTGGGGATAAAATGGAGACTGCCATCAACATTGGTTTCTCTTGTCGCTTGCTTCGACAAGGAATGAAACAGATTATTATTCATTTGGAGATTCCAGAAATTCAAGCATTGGAGAAGCATGAAGACAAGATGGCTATCATCAAGGCATCAAGGGAAAGTGTGTATCAACAGATATCTGAAGGTTCTAAACTGCTTTCTGCATCTAAAGGGACCTCTCAGCAAACATTTGCTCTGATAATTGATGGAAAATCACTAGTTTATGCTCTAGAGGATGGTATAAAGAACAAATTTTTAGAGCTTGCAACTCACTGTGCATCTGTTATATGCTGTCGCTCATCACCAAAGCAGAAGGCACTGGTTACTAGACTGGTCAAAGAAGGAACTGGTAAAACAACATTAGCTATCGGTGATGGAGCTAATGATGTAGGAATGATTCAAGAAGCTGATGTAGGTGTTGGAATCAGTGGTGTTGAAGGAATGCAGGCTGTCATGTCTAGCGATATTGCAATTGCGCAGTTTCGGTATTTGGAAAGATTGCTTCTTGTGCACGGACATTGGTGTTACCGGAGGATGTCCTCAATGATATGTTTCTTTTTCTACAAGAACATTACATTTGGTTTCACTCTCTTCTTATATGAAGTGTATGCATCATTCTCTGGACAGCCTGCATACAATGACTGGTTTTTATCCTTCTATAGTGTCTTGTTTTCTTCACTTCCTGTCATTGCGCTTGGAGTCTTTGACCAAGATGTATCTGCCAGGTACTGCCAGAAGTTTCCTATCTTATACCAAGAAGGTGTACAAAATGTCCTATTTAGCTGGCGCCGAATTCTAAGCTGGATGCTCAACGGATTCATCAGTGCCATAACAATTTTCTTCTTCTGCACAAAAGCGATAGGCCTTCAAGCCTTCGACGAGAATGGGAAAACTGCCGGAAAAGACATGCTAGGAGCAACCATGTATACTTGCGTCGTTTGGGTTGTAAACCTACAAATGGCGCTTGCCGTGCAATACTTCACCTTGATACAACATATTGCCATTTGGGGTTCTATTGCTCTTTGGTATTTCTTCATGTTTGTTTATGGATCATTGCCTTCAAGCTTTTCCACAAATGCTTACAAAGTCTTTGTTGAGACTCTTGCTCCATCTCCTTCCTTTTGGATTGTCACATTATCCGCGGCGATTTCTTCGCTTATACCATACTTTTCGTTCTCCACGATTAAAATGTGGTTCTTTCCTATGCATCATGAAAGGGTACAATGGATGAGGTATGAGAGCAAGAAGACTAATGAACCTGAATAG 3504 0.3887 MKMKKIHFSKIYSFKFGKKTKFRKEHSQIGRQGYSRVVLCNELQDSFESDLIRNYADNSVRSTKYTVATFFPKSLFEQFRRVANFYFLVAGILAFTKLAPYTAVSAILPLCIIVGATMVKEGIEDLRRKKQDIEVNNRKVIFHKGDGNFEYTEWKNLRVGNIVKIKKDEFFPADLLLLSSSYEDAVCYVETMNLDGETNLKLKQGLEVTSSLNEEVKLHDFKATIKCEDPNANLYSFVGSMEFEGQKYPLSPQQLLLRDSKLRNTDYVFGAVIFTGHDTKVIQNTTDPPSKRSKIEKKMDKIIYFLFGVLFLIAFVGSILFGIVTKRDLHNGFMKRWYLRPDDSTIFFDPKRVAAASVYHFLTALMLYNFFIPISLYFSIELVKILQSIFINQDINMYYEELDKPALARTSNLNEELGQIDTILSDKTGTLTCNSMEFIKCSVAGVAYGRVVTEVEQAIGSISNSSPMIHEHVNRLEPITVDTKEAHDRKEPIKGFNFIDERIMNGNWVNEPHADVIQKFFRLLAVCHTAIPEVNDDTGRVTYEAESPDEAAFVIAAREVGFTFYKRSQNSLSMKELDPVSGNEVERTYKILHVLEFNSSRKRMSVIIKDEEGRILLLCKGADSVMFERLALNGRDFEEKTLEHVGEYADAGLRTLILAYRELDEEEYNEFDDKFTEVRNSVTVDRESLIEELSDKIERNLVLLGATAVEDKLQDGVPDCIEKLAQARIKIWVLTGDKMETAINIGFSCRLLRQGMKQIIIHLEIPEIQALEKHEDKMAIIKASRESVYQQISEGSKLLSASKGTSQQTFALIIDGKSLVYALEDGIKNKFLELATHCASVICCRSSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADVGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRMSSMICFFFYKNITFGFTLFLYEVYASFSGQPAYNDWFLSFYSVLFSSLPVIALGVFDQDVSARYCQKFPILYQEGVQNVLFSWRRILSWMLNGFISAITIFFFCTKAIGLQAFDENGKTAGKDMLGATMYTCVVWVVNLQMALAVQYFTLIQHIAIWGSIALWYFFMFVYGSLPSSFSTNAYKVFVETLAPSPSFWIVTLSAAISSLIPYFSFSTIKMWFFPMHHERVQWMRYESKKTNEPE 1167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01762 1167 NCBIfam HAD-IC family P-type ATPase 841 951 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Trre6g01762 1167 SFLD C1.7: P-type atpase like 406 920 - -
Trre6g01762 1167 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 503 675 IPR023299 GO:0000166
Trre6g01762 1167 FunFam Phospholipid-transporting ATPase 116 286 - -
Trre6g01762 1167 SUPERFAMILY Calcium ATPase, transmembrane domain M 51 1147 IPR023298 -
Trre6g01762 1167 Pfam Phospholipid-translocating ATPase N-terminal 52 106 IPR032631 -
Trre6g01762 1167 FunFam Phospholipid-transporting ATPase 704 909 - -
Trre6g01762 1167 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Trre6g01762 1167 PRINTS P-type cation-transporting ATPase superfamily signature 869 888 - -
Trre6g01762 1167 SFLD p-type atpase 406 920 IPR044492 -
Trre6g01762 1167 CDD P-type_ATPase_APLT_Dnf-like 57 1029 - -
Trre6g01762 1167 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Trre6g01762 1167 Pfam Cation transport ATPase (P-type) 526 629 - -
Trre6g01762 1167 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 34 1158 - -
Trre6g01762 1167 NCBIfam phospholipid-translocating P-type ATPase 55 1154 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Trre6g01762 1167 Gene3D - 704 909 IPR023214 -
Trre6g01762 1167 Gene3D - 549 703 IPR023299 GO:0000166
Trre6g01762 1167 Pfam Phospholipid-translocating P-type ATPase C-terminal 897 1147 IPR032630 -
Trre6g01762 1167 SUPERFAMILY HAD-like 419 924 IPR036412 -
Trre6g01762 1167 Gene3D - 117 286 - -
Trre6g01762 1167 SUPERFAMILY Calcium ATPase, transduction domain A 142 283 IPR008250 -
Trre6g01762 1167 FunFam Phospholipid-transporting ATPase 546 704 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01762 Trre-Chr6 14457791 14464131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01762 6 1167 Primary Pumps ATPases AT1G68710 70.539 0.0 1759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01762 K01530 - gmx:100798329 1929.45