Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01751 ATGGAAAATGTTTCAGTTTTGTGTAAGGAAGAGGATCAAATGGATTTGCCACCAGGGTTTAGGTTTCATCCAACTGATGAAGAGCTTATTAGTCATTACCTTTTAAGAAAGGTAACTGACACAAACTTTTCTGCTAAGGCCATTGGAGAGGTTGATTTAAACAAATCTGAACCTTGGGATTTGCCATGGAAAGCAAAAATGGGTGAGAAAGAGTGGTATTTTTTTTGTGTAAGAGATAGAAAATATCCAACTGGTTTGAGGACTAATAGAGCAACTGAAGCTGGATATTGGAAAGCAACAGGAAAAGATAAGGAGATTTATAGAGGAAAATCTCTTGTTGGAATGAAAAAAACTCTTGTTTTCTACAAAGGAAGAGCACCTAAAGGAGAGAAAACTAATTGGGTGATGCATGAATATAGACTTGATGGTAAATTGTCTGTTCATAATCTTCCTAAAACTGCTAAGAATGAGTGGGTGATTTGCAGGGTATATCAGAAGAGTTTATCAAGCAAAAAGACATGTTTTTCTGGGATAATGAGGTTAAACTCTTTTGAAAATGAACTTGGTTCTTCTATTCTTCCACCACTCACAGAATCTTCACCTTATTCCATTGACAAAATCAAATCACCTTACGTGTCCTGCTTCTCCAATCCAATTGAAAGAAACCAAGTTGGAATCTTTGATAGCTTTAGCAACAACCCTTTTGAGGTTCCTTCAAATCTTTCAATTAATCTTCCAAAAAACACTCTTTCTATTGGTTCATTTTACTCTAATCAAGAGGTTCAAACCAAACCAAATTTGCTATTATCTGGTTCTGTTTATAACAATGGATCAAACTTTGAGAATCAGCAACACTTACCTGTTTCAACTGCACCAATTGATATATCTACCTTGTGGAATTATTAA 906 0.3499 MENVSVLCKEEDQMDLPPGFRFHPTDEELISHYLLRKVTDTNFSAKAIGEVDLNKSEPWDLPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGKSLVGMKKTLVFYKGRAPKGEKTNWVMHEYRLDGKLSVHNLPKTAKNEWVICRVYQKSLSSKKTCFSGIMRLNSFENELGSSILPPLTESSPYSIDKIKSPYVSCFSNPIERNQVGIFDSFSNNPFEVPSNLSINLPKNTLSIGSFYSNQEVQTKPNLLLSGSVYNNGSNFENQQHLPVSTAPIDISTLWNY 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01751 301 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 236 - -
Trre6g01751 301 SUPERFAMILY NAC domain 12 166 IPR036093 GO:0003677|GO:0006355
Trre6g01751 301 Gene3D NAC domain 25 169 IPR036093 GO:0003677|GO:0006355
Trre6g01751 301 FunFam NAC domain-containing protein 100-like 25 170 - -
Trre6g01751 301 ProSiteProfiles NAC domain profile. 16 166 IPR003441 GO:0003677|GO:0006355
Trre6g01751 301 Pfam No apical meristem (NAM) protein 17 141 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01751 Trre-Chr6 14392544 14393947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01751 14 301 NAC Transcription Factor Family AT5G07680 58.438 2.90e-120 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Trre6g01751 NAM 3.1e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01751 - - gmx:100170719 444.121