Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01726 ATGGAGAATATTGATCAACTCACGGTTTGGAAATATGATCATCCAATACAAGATTATGATCCATTTGCATTTCCTTCCACATTACCTTCATATGATGAAAATAATAATAATCTTTATAGAGGAAATGCAAGTGATGGTTATTATTCAAAAGATTGGTCACATTATGGATTTCCCATGCTAGATACTAATTCTTATGTTCCTTTCAAGGATAATTATTTTCCTGAATTTCAATATGAAACTGATCTTACTCAATTGCCAACTCAAATAAGCGTAGAAGACTTTGATTTATGTGATGCTAAAAATTTACTTCCAATGTGGAACGAAGTTGATGTTGGATTTTATTCCGATAATAATGTGTTTCCTATAAGCAGCAATATTGTAGAAAATAATGCAAAGGAAATTATGAAGGGTAAGCGTTGTAGAGAAGAAAATAGTGCAAGAATGTTAACAAGGAAGACAATTTCTGAGTACTTCTATATGCCAATTTCACAAGCTGCTAGAGAGCTTAATGTTGGTCTTACACATTTGAAGAAAAGGTGTAGGGATCTTGGAATTCAAAGGTGGCCACATAGAAAACTAATGAGCCTTCAAACCCTCATAAAGAATGTTCAAGAGCAGAGTAATGAAAGTGATGAAAAAATAAGGAATGCGGTTGAAATATTGCAAAAAGAAATGAAGAAGGTAGAGGAAAAGCCAGATTTGCAACTTGAAGAAAATACAAAAAGGCTTAGACAAGCATGTTTCAAGGCCAATTACAAGAAGAGAAGGCTCATGGTCATGAGATTAATGGATCATCAACAGTCTTTGGTCAGTGAAAGTGAAAGTGTTAATGATCACATAAGGGTTTAA 849 0.3333 MENIDQLTVWKYDHPIQDYDPFAFPSTLPSYDENNNNLYRGNASDGYYSKDWSHYGFPMLDTNSYVPFKDNYFPEFQYETDLTQLPTQISVEDFDLCDAKNLLPMWNEVDVGFYSDNNVFPISSNIVENNAKEIMKGKRCREENSARMLTRKTISEYFYMPISQAARELNVGLTHLKKRCRDLGIQRWPHRKLMSLQTLIKNVQEQSNESDEKIRNAVEILQKEMKKVEEKPDLQLEENTKRLRQACFKANYKKRRLMVMRLMDHQQSLVSESESVNDHIRV 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01726 282 Coils Coil 193 231 - -
Trre6g01726 282 ProSiteProfiles RWP-RK domain profile. 132 217 IPR003035 -
Trre6g01726 282 PANTHER PROTEIN RKD4 141 264 IPR044607 GO:0003700
Trre6g01726 282 Pfam RWP-RK domain 149 196 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01726 Trre-Chr6 14111828 14113505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01726 138 256 AtRKD Transcription Factor Family AT1G18790 61.719 5.21e-50 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Trre6g01726 RWP-RK 2.3e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01726 - - psat:127081291 409.838